| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2343 |
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| Symbol | |
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| ID | 5194153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2674417 |
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| End bp | 2675844 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586800 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001267666 |
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| Protein GI | 148547564 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.835742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCACA GCATCCTGGT CGTCGAGGAT GATGAAATCC TTGCCGACAA CATTCGCACC
TACCTCAGCC TCAAGGGCTA CGAAGTCATC GTGTGCCACA GCGCGGAGCT GGCGCTGGAG
CAGATCAAGC GGGCGCAACC TGACGCGGTG CTGACCGACA ACTCGTTGCC AGGCATGAGC
GGGCACGACC TGCTGCGGAC GCTGGTGGCC CGCGCGCCGG ACCTTAAAGT GATCATGATG
ACCGGCTACG GCAATGTCGA AGATGCCGTG CAGGCGATGA AGGAGGGCGC CTTTCATTAC
CTGACCAAGC CGGTAGTACT GGCCGAGCTC AAACTGACCC TGGACAAGGC CCTGGCTACC
GAGCGTATGG AGCGCACACT GTCATTCTAC CAGGAGCGTG AGGCGCAGAA GTCCGGGTTG
CAGGCATTGA TCGGCGAGTC GCCGGTGATG CTCACCCTCA AGCACACCCT GCGCCAGGTG
CTCGATGCCG AGCGGCGCAT GGCCAGTGAC GACCTGCCAC CGGTGCTGAT CGAAGGCGAG
ACCGGTACGG GCAAGGAACT GGTGGCCCGT GCCCTGCATT TTGATGGTTC GCGCAGTAAA
GGGCCGTTCA TCGAGTTCAA TTGCGCTTCG ATCCCTGCCA ACCTGCTTGA GGCTGAACTG
TTTGGCCACG AGAAGGGCGC GTTCACCGAT GCCAAGGAGC GCCGGGTGGG GCTGGTGGAG
GCTGCCGATG GCGGCACCCT GTTCCTTGAC GAGATCGGCG AAATGGACCT GGTGCTGCAG
GCCAAGCTGC TCAAGTTGCT GGAGGACCGC AGCATCCGCC GGATTGGTGC GGTGAAGGAA
CGCAAGGTGG ATCTGCGGGT GATCAGCGCC ACCAACTGTA ACCTGGAGCA AATGGTGCAG
CAGGGCAAAT TCAGGCGTGA CCTGTTCTTC CGGCTTCGCA TTATCGCCCT GAAGGTGCCG
CGCCTGTATT CGCGTGGGCA GGACATTCTG CTACTGGCGC GGCATTTCCT TGCCCACCAT
AGCCGGCGTT ATGGCAAGCC GAACCTGCGC TTTTCAGCCG AAGCCGAAAG CCTGATGCTC
GGTTATAGCT GGCCTGGCAA TGTGCGTGAA TTGCGCAACA TGCTGGAGCA GACCGTGTTG
CTGGCGCCGA ACGAGGTGGT GCAGGCGCAT CAGTTGAACC TGTGCATGAC CTTGGTTGAC
GAGCCGTTGG CGCAACAGCC GATGGCGACC ATGTTCGAAA TGCCGCGGCA CGAGCCAGAG
CCGGGTACAA GCCTGCCTGA CATGGAGCGT GACCTTGTCT GCAAGACCCT GGACCGCACC
GACTGGAACG TGACCAAGTC GGCGCGGATG CTTGGGTTGT CGCGGGATAT GCTGCGTTAC
CGGATCGAGA AGTTGGGGCT GACCCGGCCT GACAAGCGTC AGTGGTAG
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| Protein sequence | MEHSILVVED DEILADNIRT YLSLKGYEVI VCHSAELALE QIKRAQPDAV LTDNSLPGMS
GHDLLRTLVA RAPDLKVIMM TGYGNVEDAV QAMKEGAFHY LTKPVVLAEL KLTLDKALAT
ERMERTLSFY QEREAQKSGL QALIGESPVM LTLKHTLRQV LDAERRMASD DLPPVLIEGE
TGTGKELVAR ALHFDGSRSK GPFIEFNCAS IPANLLEAEL FGHEKGAFTD AKERRVGLVE
AADGGTLFLD EIGEMDLVLQ AKLLKLLEDR SIRRIGAVKE RKVDLRVISA TNCNLEQMVQ
QGKFRRDLFF RLRIIALKVP RLYSRGQDIL LLARHFLAHH SRRYGKPNLR FSAEAESLML
GYSWPGNVRE LRNMLEQTVL LAPNEVVQAH QLNLCMTLVD EPLAQQPMAT MFEMPRHEPE
PGTSLPDMER DLVCKTLDRT DWNVTKSARM LGLSRDMLRY RIEKLGLTRP DKRQW
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