| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2340 |
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| Symbol | |
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| ID | 5192321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2670366 |
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| End bp | 2671022 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586797 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001267663 |
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| Protein GI | 148547561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCGG GTTTTCCGGG GCATTTCCCC CACATCGGGG GCCACGACGA AGAGGCGACC
GGCATGCGTG GACTCATCCT CGGTTTGATC TGGCTGGCGG CAGGTGCTGC CCAGGCCGAT
GTGTACATCT CAATCGATGC CAAGGGTGGC TACGTACTGA CCAATGTCCA TCGACCAGGG
CGACACTATG AGAAGGTGAT CAGCGAGCCG CTGGCCCAGG GCGGGCCGGT CAAAGCGCAG
ATGATCACCG GCCGCCCTTA CGCCGAGGTA GTCGCCACGG CTGCGCGCCT CCACAACCTG
CCGCCGGCGC TGCTGCACGC GGTGATCAAG GCCGAGTCCG GCTACAACCC CAAAGCCCGT
TCGCGGGCGG GTGCAGTGGG GTTGATGCAA CTGATGCCGG ACACCGCCCG CGAGATGGGG
GTGCAAGACC GCCTGGACCC GGAAGACAAT GTGCAGGGCG GGGCACGCTA CCTCAAGCAG
ATGCTCACCC TGTTCGACAA CGACATCACC TTGGCCGTGG CGGCCTACAA CGCTGGCCCG
GATGCTGTAC TGCGGCGCGG TGCCGTGCCG CCGTTTGCCG AGACCCGGCG CTATGTGCCC
ACGGTGCTGC GCGAGTATCG AAAGTTGCAA GGGTTGACGG ATGATTCGTC TTTGTAA
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| Protein sequence | MSSGFPGHFP HIGGHDEEAT GMRGLILGLI WLAAGAAQAD VYISIDAKGG YVLTNVHRPG
RHYEKVISEP LAQGGPVKAQ MITGRPYAEV VATAARLHNL PPALLHAVIK AESGYNPKAR
SRAGAVGLMQ LMPDTAREMG VQDRLDPEDN VQGGARYLKQ MLTLFDNDIT LAVAAYNAGP
DAVLRRGAVP PFAETRRYVP TVLREYRKLQ GLTDDSSL
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