| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2328 |
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| Symbol | |
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| ID | 5190403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2652738 |
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| End bp | 2654324 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586785 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001267651 |
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| Protein GI | 148547549 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTTA CCGCCAAACG CCGCGCCGCA CTCAGCTGGC GCACGCTCTT GCCTTGGGTC
GTCGGCCTTC TGCCGGTCAT GTGCGGCCTG GCCGTGATGA ACTGGCAGGT CGAGCGTGAA
ATGCAGGCCA GCAGCCACGC CACCACCCGC CAGGCGTTGG AGCACGTCGA ACACATCCTC
GACAACCTGT CCCGAGCCGC CAATTCGCTG CTTCCACTGA CTGACAGTTC ATGCGAGCAG
GCCCAGCTCA TGCTACGGGC CCAGGTTACC CGCAATGCCT TCGTGCGCTC GACCAACCTG
TTCAGGCACA ACAACCTGTA TTGCACCTCG CTGTTCGGCG AGTTCGATGA ACCGGTCAAT
CCTGGCGATT ACGTCGACGG CAAGTTATGG CTGATGGACG GCAACTCGGT TACGCCGGGC
CACCCGCTGC TGGTCTACCG TGCCAGCGAC GGCGACCACG GCGCAATCAC CACGGTGGAT
GGCGACCACC TGCTGACAGC ACTGCGCCTG ATCGGGCCCG ATGAAGAACT GCAAATACGC
GTGGGCGACG CGTGGATGGG CAAGGACGGC GTGGTCCACA AAGGCGTCTC CCCTGCCGCC
CCCAGCGCCA ACGTGCTGAT AGGCTCGACG CGTTACCCTT TCAGCGTGCA GGGCGGCTAC
AGTGCCGACA AGCAAGGCCA ACTGTTGCGC AGCCACTACC CTGGCCTGCT CAGTCTGTTG
CTGGTACTGG GTGCCCTGGC GGCGCTGGCG TGCCGCTGGC AGATTCGCCG CGCCACCTCA
CCGCGTGCCG AACTGGACCG CGCCCTGCAG GCCGATGAAT TCCTGCCGTA TTTTCAGCCG
GTGGTGCGCA AGGGGGATTA CCGCTGGGCC GGTGCGGAAG TGCTGATGCG CTGGCACCAC
CCACGAGAAG GCCTGGTTCG CCCCGACCTG TTCATCCCCT ATGCCGAACA CAGCGGGCAG
ATTGTCGCCA TGACCCGCGC GCTGTTGACC CATACCGCGC AAAGCCTGGC GCCTTATGCC
GGGTTGTTGG AAGACGGCTT CCATATTGGT GTCAACATCA CCGCTGACCA CTGCCGCGAC
CTCAGCCTGC TGGATGACTG TCGCACGTTC CTGCAGCACT TTCCGCCCGG CCGGGTGGTG
CTGACCCTGG AACTGACAGA GCGCAAGCTG ATCGAGCCCA CGCCGGTCAC CCTTGAGTTG
TTCGAAAAGC TGCATGCCAT GGGCGTGATG ATCGCCCTCG ACGACTTCGG CACCGGCCAG
TCGAGCCTCA ACTACCTGCG GCAATTCAAG GTCGACTACC TGAAGATCGA CCAGAGCTTC
GTTGCCATGA TCGGCGCCGA TGCGCTGTCA GTGCACATAC TCGAGAGCAT CATTGAACTG
TCAGGAAAGC TGGACCTGGG CATCGTCGCC GAGGGTGTGG AAACCGACCT GCAGCGCGAC
TACCTGGCCA AGCATGGGGT GGACTTCCAG CAGGGTTACC TGTTCGCCAG GCCCATGCCA
GCCGCCCAGT TCCTCGCAGC CTTGGCCACC CGCCCGGGCG CAACGCAGTT GCCGCAAGAT
GCGCCCCCTG AGATCATGCG CGGCTGA
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| Protein sequence | MPLTAKRRAA LSWRTLLPWV VGLLPVMCGL AVMNWQVERE MQASSHATTR QALEHVEHIL
DNLSRAANSL LPLTDSSCEQ AQLMLRAQVT RNAFVRSTNL FRHNNLYCTS LFGEFDEPVN
PGDYVDGKLW LMDGNSVTPG HPLLVYRASD GDHGAITTVD GDHLLTALRL IGPDEELQIR
VGDAWMGKDG VVHKGVSPAA PSANVLIGST RYPFSVQGGY SADKQGQLLR SHYPGLLSLL
LVLGALAALA CRWQIRRATS PRAELDRALQ ADEFLPYFQP VVRKGDYRWA GAEVLMRWHH
PREGLVRPDL FIPYAEHSGQ IVAMTRALLT HTAQSLAPYA GLLEDGFHIG VNITADHCRD
LSLLDDCRTF LQHFPPGRVV LTLELTERKL IEPTPVTLEL FEKLHAMGVM IALDDFGTGQ
SSLNYLRQFK VDYLKIDQSF VAMIGADALS VHILESIIEL SGKLDLGIVA EGVETDLQRD
YLAKHGVDFQ QGYLFARPMP AAQFLAALAT RPGATQLPQD APPEIMRG
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