| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2230 |
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| Symbol | |
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| ID | 5195031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2539553 |
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| End bp | 2540962 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586687 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001267553 |
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| Protein GI | 148547451 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.630416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT ACGAACGCTT CGCCGATGAC ATTGCCGAAC TGATCCGCTC CGGGGTGCTG
GGCCCCGGCC AGCGCGTGCC GTCCGTACGC TACGCCAGCC AGACCCACGG GGTCAGCCCG
TCTACCGTGT TCCAGGCCTA TTACCTGCTG GAACGCCGCG GGCTGATCCG CGCCCGGCCG
CGCTCCGGGT ATTTCGTCAA CGCCCACGTG CCGCGTCAGT TCAGCGAGCC GCAGGCGCTG
CAGCCGGTGA GCGAGTCTAC CGATGTCGAC GTCAGCGCCT TGGTATTTTC GATCCTCGAC
TCGATCAAGG ACCCCAACAC CATTGCCTTC GGCTCAGCCT TTCCCAGCCC TGAGCTGTTC
CCGCTGCAAC GCCTGTCGCG CTCACTGGCC AGTGCCAGCC GCAGCATGGA CCCGCGCATG
GTGGTGACCG ATCTGTCCCC CGGCAACCCG CAGCTGCGCC GGCAGATCGC CCTGCGCTAC
ATGGTCGGTG GGCTGATGCT GCCAATGGAA GAGCTGCTGA TCACCAACGG CGCACTGGAG
GCCCTGAACC TGTGCCTGCA GGCCGTGACC CAGCCGGGCG ATCTGGTCGC CATCGAGGCC
CCGGCCTTCT ATGCCTGCCT GCAGGTGCTG GAGCGGCTCA AGCTCAAGGC CGTGGAAATC
CCCGTGCACC CGCGCGAGGG CATGGACCTG GGGGTGCTGG CGCAGACCCT GGAAAAGCAC
CCGGTAAAGG CCGTGTGGTG CATGACCAAT TTCCAGAACC CAGTGGGTGC AAGCATGCCG
GAGGCCAAGA AACAGGCGCT GGTGGAGTTG CTGGCACGCC ATCAGGTGCC GTTGATCGAA
GACGACGTGT ACGCCGAGCT GTACTACTCG CAACAGGCGC CCAAACCCGC CAAGGCCTTC
GACACTCAGG GCCTGGTCAT GCACTGCGGC TCGTTCGCCA AAAGCCTGGC ACCGGGCTAT
CGCATTGGCT GGGTGGCCGC CGGGCGCTTT GCGCAGAAGA TCGAGCGGTT GAAACTGATG
ACCTCCCTGT GTGCCTCCAT GCCGGCCCAG GCGGCCATCG CCGACTACCT GCAACACGGC
GGCTACGACC GCCACCTGCG CAAGCTGCGC TACGCGCTGG AGGGCCAGCA GGCCAACATG
CTGGCAGCCA TCGCCCGCCA CTTCCCGGCG CAGACACGGG TCAGCCAGCC CTCCGGCGGC
TACTTCCTGT GGCTGGAACT GCCCGAGCAG ATGGACGCCC TCAAGCTGTT CCACATGGCC
CTGGCCCAAG GCATCAGCAT CGCCCCTGGG CCGATCTTTT CGCCCACCCG ACGCTTTGGC
AATTGCATCC GCCTGAACTA CGGCAGCCCC TGGCATGACG GCGCCGAACA GGCCATGGAA
ACCCTCGGGC GGATCATTCG CTCGTTCTGA
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| Protein sequence | MKRYERFADD IAELIRSGVL GPGQRVPSVR YASQTHGVSP STVFQAYYLL ERRGLIRARP
RSGYFVNAHV PRQFSEPQAL QPVSESTDVD VSALVFSILD SIKDPNTIAF GSAFPSPELF
PLQRLSRSLA SASRSMDPRM VVTDLSPGNP QLRRQIALRY MVGGLMLPME ELLITNGALE
ALNLCLQAVT QPGDLVAIEA PAFYACLQVL ERLKLKAVEI PVHPREGMDL GVLAQTLEKH
PVKAVWCMTN FQNPVGASMP EAKKQALVEL LARHQVPLIE DDVYAELYYS QQAPKPAKAF
DTQGLVMHCG SFAKSLAPGY RIGWVAAGRF AQKIERLKLM TSLCASMPAQ AAIADYLQHG
GYDRHLRKLR YALEGQQANM LAAIARHFPA QTRVSQPSGG YFLWLELPEQ MDALKLFHMA
LAQGISIAPG PIFSPTRRFG NCIRLNYGSP WHDGAEQAME TLGRIIRSF
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