Gene Pput_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2217 
Symbol 
ID5190961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2519877 
End bp2522021 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content65% 
IMG OID640586674 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001267540 
Protein GI148547438 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGC GACAACTTTC CATCCAGTGG AAGATCACCC TGCTCGCCGG TCTCTGTCTG 
GCCGCTATCG TCACCTTGCT CGTCGGCCTG TCGCTGTACC GCATGGATCA CAGTTCGGAC
CTGGTCAAGG CCAGCAGCAT GCAGATGCTG ACCGAGGCGG CGCAGTCGCG TATCGAGTCA
CAAGGTGAAG TGCAAGCGCT GAACATTCGC CGCCAGTTCA TGGATGCCTA CCAGTACGGC
GCCGGCTTCG CCCGTCAGGT GCTGTTCCTG CGCGAGCAGG CCGAAAAGCG CTTTCTCGAT
GCCTTCGACC TGCGCGAGGA CATGACCCGC CAGGTACGCG CCGCACTGCA AGCCAACCCC
GACCTGCTCG GCCTGTCACT GGTATTCGAG CCCAATGCCC TGGACAACAA GGACAGCCTG
TTTGCCGGCA AGGCAGAATT GGGCAGCAAC GAAACCGGGC GCTTTGCCCT GTACTGGTCG
CAGCCACGCG CCGGCCAGTT GACCGCGATG GCCCTGCCCG AACATGACAT GGCCAACACC
GAGATCGGCC CCAGCGGCCA GCCGGCCAAC ACCTGGTGGG TATGCCCACG CACCTCCGGC
AAGGTGTGCG TGGTAGAGCC GTACTTCTAC GACATCGATG GCCAGCAGGT GCTGATGACC
AGCATCGTGT TCCCGCTGGC GGTCAACGGC AAGATCATTG CCACCCTGTC CATCGACATC
AACCTCAATA GCCTGCAGGC GCTGAGCCAA GAGGCCAGCC GCAGCCTCTA CGAAGGCCGC
ACCACGGTCG GCATTCTGAC CCCGGTCGGC CTGCTGGCCG GCTACAGCGC CGATGCCAGC
AAGCTGGCCC AGCGCTTCGA CCAGGTAGAC ACGACCAAAG GCGCCGAGCT GGTGCGCAAG
CTGGCCGATG GCAAGCTGAC CATCCTCCAC GACCGGCAGC GCCTGAAGGT ACTGGCGGCA
TTCCGGCCAA TCCCGGACGC CCAGCCCTGG GGCGTGTTGC TGGATGTGCC GGAAAACGCC
CTGACCGGGC CGGCCGAAAC CCTGAAGCAG GAACTTGACG CGCTCAATAC CAGCGGCACC
TTGCTGGAAC TGAGCCTGGG CCTGGCCGCC GCCATTGTCG GCCTGCTGCT GGTATGGCTG
ATGGCCCGCG GCGTTACCCG GCCGATCCTC GGCGTGGCCG CCATGCTCAA GGACATTGCC
AGCGGCGAAG GCGACCTGAC CCGTCGCCTG ACCTACCAGA AACAGGACGA ACTGGGCGAA
CTGGCCGGCT GGTTCAATCG CTTCCTCGAC AAGTTGCAGC CAACCATTGC CGAGGTCAAA
CGCTCGGTGC AGGCCGCCCG AGGCACGGCC GACCAGTCCT CGGCGATTGC CACTGAAACC
AGCGCCGGCA TGGAGCAGCA GTACCGCCAG GTCGACCAGG TGGCCACCGC CTCGCATGAA
ATGAGCGCCA CCGCCCAGGA CGTTGCCCGC AGCGCCGCCC AGGCGGCACA GGCGGCGCGC
GATGCCGACC AGGCCACCCG CGAAGGCTTG GCGGTAATCG ACCGCACCAC CAGCAGCATC
GGTGCCCTGG CCGCCAACAT GAGCGACACC ATGGCCGAAA TAGAAGGCCT GGCGCAGAAC
AGCGAGAAGA TCGGCTCGGT ACTGGAAGTG ATCCGCTCGA TCGCCGAACA GACCAACCTG
CTGGCACTCA ACGCTGCCAT CGAAGCTGCC CGCGCCGGAG AGGCCGGCCG TGGCTTTGCC
GTGGTCGCCG ATGAGGTGCG CAACTTGGCC CAGCGCACTC AGGAGTCGGT GGAAGAAACC
CGGCAGGTCA TCGAAGCCCT GCAGAACGGC ACCCGCGAAG TGGTCGGCGC CATGGACCAC
AGCCACCGCC AGGCCCAAGG TGGCGTGGAG CAGGTCGGCC AAGCCGTCAC GGCATTGCAG
CGCATTGGCC AGGCGGTGAC GGTGATCACC GACATGAACC TGCAGATCGC CTCTGCCGCC
GAGGAGCAAA GCGCGGTAGC CGAGGAAATC AACAGCAACG TGGCGACCAT TCGTGATGTC
ACTGAATCCC TGTCAGGCCA GGCCAACGAG TCGGCGCGGG TCAGCCAGTC GCTGAACAGC
CTGGCCAACC AGCAGCAAGC GCTGATGGAC CAGTTCCGCG TCTGA
 
Protein sequence
MPLRQLSIQW KITLLAGLCL AAIVTLLVGL SLYRMDHSSD LVKASSMQML TEAAQSRIES 
QGEVQALNIR RQFMDAYQYG AGFARQVLFL REQAEKRFLD AFDLREDMTR QVRAALQANP
DLLGLSLVFE PNALDNKDSL FAGKAELGSN ETGRFALYWS QPRAGQLTAM ALPEHDMANT
EIGPSGQPAN TWWVCPRTSG KVCVVEPYFY DIDGQQVLMT SIVFPLAVNG KIIATLSIDI
NLNSLQALSQ EASRSLYEGR TTVGILTPVG LLAGYSADAS KLAQRFDQVD TTKGAELVRK
LADGKLTILH DRQRLKVLAA FRPIPDAQPW GVLLDVPENA LTGPAETLKQ ELDALNTSGT
LLELSLGLAA AIVGLLLVWL MARGVTRPIL GVAAMLKDIA SGEGDLTRRL TYQKQDELGE
LAGWFNRFLD KLQPTIAEVK RSVQAARGTA DQSSAIATET SAGMEQQYRQ VDQVATASHE
MSATAQDVAR SAAQAAQAAR DADQATREGL AVIDRTTSSI GALAANMSDT MAEIEGLAQN
SEKIGSVLEV IRSIAEQTNL LALNAAIEAA RAGEAGRGFA VVADEVRNLA QRTQESVEET
RQVIEALQNG TREVVGAMDH SHRQAQGGVE QVGQAVTALQ RIGQAVTVIT DMNLQIASAA
EEQSAVAEEI NSNVATIRDV TESLSGQANE SARVSQSLNS LANQQQALMD QFRV