Gene Pput_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2193 
Symbol 
ID5195482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2493007 
End bp2494644 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content65% 
IMG OID640586650 
Productphosphoglucomutase 
Protein accessionYP_001267516 
Protein GI148547414 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0033] Phosphoglucomutase 
TIGRFAM ID[TIGR01132] phosphoglucomutase, alpha-D-glucose phosphate-specific 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.739749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCA GTCCTTTGGC AGGCAAGCCG GCTCCAGCCA GCGTGCTGGT CGATATTCCC 
CGGCTGCTTA CCGCCTATTA CACGGGCCGC CCAGACGCTG CCGTGGCGGC CCAGCGCGTG
GCCTTCGGCA CCTCGGGGCA CCGGGGCAGT TCGCTTGAAT TGAGTTTCAA CGAGTATCAC
GTCCTGGCCA TTAGCCAGGC GATCTGCCTG TACCGCCAGG AAAAAGGCAT CGATGGCCCG
CTGTTCATCG GCGCCGATAC CCACGCCCTG TCAGCGCCGG CGACCGCCAG CGCCCTGGAA
GTGCTGGCCG CCAACGGCGT GCAGGTGATG CTGTCCAAGG ATGACGAATA CACGCCGACG
CCGGCGGTTT CCCACGCCAT CCTCTGCCAC AACCGTGGCC GCACGCAGGG CCTGGCTGAC
GGTATTGTCA TCACCCCGTC GCACAACCCG CCGCAAAGCG GTGGCTTCAA GTACAACCCG
CCCAACGGCG GCCCGGCCGA CAGCGACGTG ACCAAGTGGA TCGAGGGCAA GGCCAACGAG
CTGCTGGCGG CTAACCTGGC GGGCGTCAAG CGCATGGACC ATGCCCAGGC GCTGCAGGCG
CCGACCACCC ACCGCCACGA TTACGTCAGC AACTATGTGG CCGACCTGGA AAACGTCATC
GATTTCGATG TCATCCGTGG CGCCGGGTTG CGCCTGGGCG TCGACCCGCT GGGTGGGGCA
GGGGTACGCT ACTGGTCGGC CATTGCCAAG CACTACCAGC TGGACCTGGA AGTGGTGAAC
ACCGAGGTCG ACCCGACCTT CCGCTTCATG ACCGTCGACT GGGACGGCCA GATCCGCATG
GACCCTTCCT CACCGTATGC CATGCAGGGC CTGATAGGCC TGCGCGAGCG CTTTGACGTG
GCCTTCGCCT GCGACCCGGA CCACGACCGC CACGGCATCG TCACCCCTGA CGGCCTGCTG
CAACCCAACA ACTACCTCGC CGTGGCCATC GACTACCTGT TCCGCCACCG TCCGCAGTGG
CGCACCGACG CCGCCGTGGG CAAGACCGTG GTCTCCAGCG GCCTGATCGA CCGCGTTACC
CAACGCCTGG GCCGCGATCT GTATGAGGTG CCGGTGGGCT TCAAGTTCTT CGCCCAGGGC
CTGTTCGACG GTTCGCTCGG TTTTGGTGGC GAAGAAAGTG CAGGGGCTTC GTTCCTGCGC
CGCGATGGCT CGGTGTGGGC CACCGACAAG GACGGGTTGA TCCCGGCCTT GCTGGCCGCC
GAAATGACCG CCCGTACCGG GCGTAACCCG AGCCAGGCTT ATGCCGACCT GACCGAGGCA
CTGGGCAAGC CGTTCGCCAC CCGTGTCGAG GCCAAGGCCG ATGCGCGGCA GAAGGCGTTG
CTGAGCAAGC TGGCGCCGGA GCAGGTGAAG TCGACCGAAC TGGCCGGTGA GCCGATCGTG
CAGATCCTCA GCCACGCCCC AGGCAATGGC CAGGCGATTG GCGGGCTTAA GGTGATGACG
GCCAATGGCT GGTTCGCCGC GCGCCCGTCG GGTACTGAAG ACATCTACAA GATCTACGCC
GAAAGCTTCA TCGACGAGGC GCATTTGCAG CGTCTGGTGC AGGAAGCACA AGTGCTGGTC
GATGAAGCCA TTGCCTGA
 
Protein sequence
MTLSPLAGKP APASVLVDIP RLLTAYYTGR PDAAVAAQRV AFGTSGHRGS SLELSFNEYH 
VLAISQAICL YRQEKGIDGP LFIGADTHAL SAPATASALE VLAANGVQVM LSKDDEYTPT
PAVSHAILCH NRGRTQGLAD GIVITPSHNP PQSGGFKYNP PNGGPADSDV TKWIEGKANE
LLAANLAGVK RMDHAQALQA PTTHRHDYVS NYVADLENVI DFDVIRGAGL RLGVDPLGGA
GVRYWSAIAK HYQLDLEVVN TEVDPTFRFM TVDWDGQIRM DPSSPYAMQG LIGLRERFDV
AFACDPDHDR HGIVTPDGLL QPNNYLAVAI DYLFRHRPQW RTDAAVGKTV VSSGLIDRVT
QRLGRDLYEV PVGFKFFAQG LFDGSLGFGG EESAGASFLR RDGSVWATDK DGLIPALLAA
EMTARTGRNP SQAYADLTEA LGKPFATRVE AKADARQKAL LSKLAPEQVK STELAGEPIV
QILSHAPGNG QAIGGLKVMT ANGWFAARPS GTEDIYKIYA ESFIDEAHLQ RLVQEAQVLV
DEAIA