| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2189 |
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| Symbol | |
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| ID | 5190281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2487891 |
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| End bp | 2489381 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586646 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001267512 |
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| Protein GI | 148547410 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.250734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTTG CCCAGACCCC ACTTCACCGT GCCCTGCAGG CACTGACCCG TGGCCGTGGC
TCGCGCCTGC TTGGTGCCGG GTTGTGCGTG GCCTTGCTCA GTGCCTGTAC CCTGAGCCCG
GACTACCACC GCCCCGAGCT GAACAGCACG GCGGCGCAGT TCAAGCATGC CGAAGGTTGG
ACCCAGGCCT CGCCGTCCGA CGCCATCGCC CGTGGCGCCT GGTGGGAAAT CTACGGTGAT
GCCGGGCTCA ACGCGCTGGT CGAAGAGCTT AACCGCAGCA ACCAGACCGT GGCGCAATCA
GAAGCCCAGT ACCGCCAGGC CCAGGCGCTG GTGCGCAGCA GCCGTGCGGC GCTGTTCCCC
AGCCTGGACC TGAGCGCCAG CAAGAACCGT TCGGCGCAGG GCACCGGCAG CTCCAGTTCC
AGCCTGTCCA ATAACAGCAG CGGCATTCGC AACACCTACA ACGCGCAGTT GGGCGTGAGC
TGGGAGATCG ACCTGTGGGG CAAGCTGCGC GAAACCCTGA ATGCCAACGA GGCCAGTGCC
GAAGCGAGTT TCGCCGACCT TGCGTCGATC CGCTTGAGCC AACAGTCGGA GCTGGTGCAG
AACTACCTGC AATTGCGGGT GATCGATGAG CAGAAGCGTT TGCTGGAAGC CACCGTGGCG
GCTTATGAGC GCTCGCTGCG AATGAACGAA AACCAGTACC GCGCCGGTGT CGCCGGCCCG
GATGCCGTGG CCCAGGCCCG TACGCAGCTC AAAAGCACCC AGGCTGACCT GATTGATCTG
ATCTGGCAGC GTGCGCAGTT CGAAAACGCC ATCGCCGTGC TGCTGGGCAA GACGCCTGCC
GACTTCGCCC TGGCCGACAG CAAGGCGATT CCCGCGTTGC CGCAAATACC GGTTTCGCTG
CCTTCGCAGC TGCTGGAGCG GCGCCCGGAC ATCGCGGCAG CCGAACGCAA CGTGATGGCG
GCCAACGCCA ACATCGGGGT GTCGCGGGCA GCCTACTTCC CGGACCTCAG CCTGAGCATG
AGTGGTGGTT ATTCCAGCAG CAGCTTCAGC AACTGGATCG AGCTGCCCAA CCGCTACTGG
TCGGTAGGCC CGCAGTTGGC GCTGACCCTG TTCGACGCCG GCAAACGCAG CGCCGAGGTC
GACCGCACGG TGGCCGTGTA TGACCAGACG GTGGCGCAGT ACCGCCAGAC CGTGCTGGAC
GGCTTCAAGG AAGTGGAAAA CCTGCTGGTT CAACTGAAGG TGTATGGCGA TGAAGCCGTG
GTGCGCCAAG AGGCGCTTGA CGCCGCCCGT GAGTCGTTGC GCCTGACCGA AAACCAGTAC
CGTGCCGGGC TGATCGGCTA TCTGGATGTG GTCAACGTGC AGACCACGGC GCTGAGCAAC
GAGCGCAGTG TGCTGAACCT GCTGCAAGGG CGCCTGGTGG CCAGTGTGCA ACTGGTGGCT
GCGTTGGGCG GCGGCTGGGA TGCAGAGCAG GCGTTTGCCG AGCAGAATTG A
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| Protein sequence | MTFAQTPLHR ALQALTRGRG SRLLGAGLCV ALLSACTLSP DYHRPELNST AAQFKHAEGW
TQASPSDAIA RGAWWEIYGD AGLNALVEEL NRSNQTVAQS EAQYRQAQAL VRSSRAALFP
SLDLSASKNR SAQGTGSSSS SLSNNSSGIR NTYNAQLGVS WEIDLWGKLR ETLNANEASA
EASFADLASI RLSQQSELVQ NYLQLRVIDE QKRLLEATVA AYERSLRMNE NQYRAGVAGP
DAVAQARTQL KSTQADLIDL IWQRAQFENA IAVLLGKTPA DFALADSKAI PALPQIPVSL
PSQLLERRPD IAAAERNVMA ANANIGVSRA AYFPDLSLSM SGGYSSSSFS NWIELPNRYW
SVGPQLALTL FDAGKRSAEV DRTVAVYDQT VAQYRQTVLD GFKEVENLLV QLKVYGDEAV
VRQEALDAAR ESLRLTENQY RAGLIGYLDV VNVQTTALSN ERSVLNLLQG RLVASVQLVA
ALGGGWDAEQ AFAEQN
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