| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2124 |
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| Symbol | |
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| ID | 5195011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2404095 |
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| End bp | 2405861 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640586581 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267447 |
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| Protein GI | 148547345 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.369008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACTGA GAGACCGTTT CAGCGAAGAA CTGCGTTACC TGAACGAACT GGGGAACGAC
TTTGCCAAGG ACAACCCACA ACTCGCGCGG TTGCTTGGCA AAGGTGCCAG CGACCCCGAT
GTCGAACGCC TGATGGAAGC CTTTGCGCTC CTGACCGCCA AGCTACGGCT GAAGCTGGAA
GACGACTTGC CAGAGCTGAC CCATCCCATG CTGCAGTTGC TCTGGCCGAA CTACCTGCGG
CCGCTGCCCA GCGCGACGAT CATCAAGTTC AGCCCGGTGA GGCAATCCCT CAGCCAGTCA
CAGCGCATCC CAAAGGGGTC GCGGCTGTTC TCGAAACCGG TAGACGGCGT GGCCTGCGAG
TTCCGCACCT GTACAGCGGT CAACATTCAT CCGTTCGAGA TCGACACGGT GGCAGCCACC
CAGACATCCG ACAGTTCCGT GATCTGCATC GGCCTTCAAT CACTGGCCGA GCGGCCGTTG
AACAGCCTGG GCTGTACCAG CCTCGACTTT TACCTCAGCG GCGATGCCCG AACCGCTCGC
ACGCTTTACC TGTGGGTTTC CCAATACCTC AAGCATGTCA GCGTGAGCAT CAATGACGTG
GTTCGTCGGC TGCCGGCAAA CAGCATCGCA TTCCCAGGGT TCAGCCCCAA CGACGCCTTG
CTGCCTTATC CACAGAACGT CTTTGATGGC TACCGCATCC TGCAGGAATA CTTCGCGTTC
CCTCAACGTT TTCACTTTTT CAGCGTTACC GGGCTGGAAA AAATCTGGCC AGCTCATGGC
AGCCAGCAGG TAAACCTCGA ATTTCACTTC ACGCGCCAGC TACCCGACTC GCTGCGTGTC
GGCAAAGCAG ATTTCCACCT GTTCTGCGCA CCTGCGGTCA ACCTGTTCCA GCACAGCGCC
GAGCCCATCG ACCTGTCCGG CAAGGACGCC ATGGTTCCAC TGAAGCCCAA GGGCACAGCG
CCGCACGGCT ACGAAATCTT CAGTGTCGAC CAGGTGATCA GCACCCGAAC GACGACTGAC
GGGAACACCG GTGAGCACCT TCGGACCTTC CGTCCCTTCG AGTCATTCGC CCATGAAATC
GAGCACGTCC AGGGGCGCAC GGCGCTGTAT TACCGCTGCC AGCTGGAAGA GTGCCTGCAC
GGCAATGGCG TCATGCATCG AATCGCCTTC GTCCGCGCCG ACGCCAACAG CTACATAGGC
GAGCTGGAAA CCGCGTCCAT CGACCTCACC TGCACCAATC GGGACCTCCC GCTGGCGCTG
GGCATTGATG ACATCAACAT TCTGACCGAA CTTACGCCGC CTCTGGCCAC CTACACCAAT
CTCTGTACAC CCACCCGCCC CTGTCGCCCG GTGCTGGACG GCCAGTTGCA GTGGGCATTG
ATCTCCAACA TGTCGCTCAA CTACCTGTCC TTGCTCTCGG TAGAGCCGCT GAAAGCGGTG
ATCCGCGCCT ACGACTTCAT GGCCCTGCAC GACATCCAGC AGGCCCGCAC CACCCGTAAA
CGCCTGGAAG GTATACGCGA CATTCATACG CAGCCCATGG ATTGGCTGAT CAAGGGGCAA
CCCATTCGCG GCCTGCACAC CCGGCTGAAA CTGGACCAGA CCGCCTTCCT CTGCGAAGGC
GACTTGTACC TGTTCAGCTG TGTGCTCGCT CATTTTTTCG CCCTGTACGC CAGCATCAAT
TCCTTCCACC AGCTGGAAGT GATCAACACC ACCAATAACG AGCACTACAC ATGGCCAATA
CAGACCGGCA AGCAACCGCT GATCTAG
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| Protein sequence | MSLRDRFSEE LRYLNELGND FAKDNPQLAR LLGKGASDPD VERLMEAFAL LTAKLRLKLE
DDLPELTHPM LQLLWPNYLR PLPSATIIKF SPVRQSLSQS QRIPKGSRLF SKPVDGVACE
FRTCTAVNIH PFEIDTVAAT QTSDSSVICI GLQSLAERPL NSLGCTSLDF YLSGDARTAR
TLYLWVSQYL KHVSVSINDV VRRLPANSIA FPGFSPNDAL LPYPQNVFDG YRILQEYFAF
PQRFHFFSVT GLEKIWPAHG SQQVNLEFHF TRQLPDSLRV GKADFHLFCA PAVNLFQHSA
EPIDLSGKDA MVPLKPKGTA PHGYEIFSVD QVISTRTTTD GNTGEHLRTF RPFESFAHEI
EHVQGRTALY YRCQLEECLH GNGVMHRIAF VRADANSYIG ELETASIDLT CTNRDLPLAL
GIDDINILTE LTPPLATYTN LCTPTRPCRP VLDGQLQWAL ISNMSLNYLS LLSVEPLKAV
IRAYDFMALH DIQQARTTRK RLEGIRDIHT QPMDWLIKGQ PIRGLHTRLK LDQTAFLCEG
DLYLFSCVLA HFFALYASIN SFHQLEVINT TNNEHYTWPI QTGKQPLI
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