Gene Pput_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2122 
Symbol 
ID5190736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2402549 
End bp2403118 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID640586579 
ProductFHA domain-containing protein 
Protein accessionYP_001267445 
Protein GI148547343 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.47433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACAG TCACCTTGAG CATCACCAAC CTCGACCAAC TGCAGCACGG CGTTACTGCT 
CGGCACCTGT TCGATTGCAA GGGCGGCACC ATCGGCAGCG GGCGAGCAAA CTGGCAGATC
AATGACCGCG ATCAGACCGT TGCGCCCATC CACTGCGAAA TCCGCTGGAT CGAAGGCAGC
TTCTGTGTGA TCGACCACTG CCACCGTACC TACCTCAATG GCAGTGCCAA CAGCCTGGGG
CCGCTTCCAC CCAGACGCCT GGTTGAGGGT GACCAGCTTC TCATTGGTAC CTATCGGCTA
CAGGTTCAGT ACACCCAGGA TCAGGCCTGC ACGCGCTCGC TGGAGGACCT GTTCAACCCG
GACCCGAGGG TGCTCGACCG CCTGATAGCG GAAGCGCCTG CACCCGCTTG GCCGGCACAG
CCTTCTGCCC CCCAACCAGC CGTCGAGATC TGCTCGGTCT TCAAAGCAGC CATGGGGAAT
GACCCTCTGG CAGCGCTGGA CGCAGCAGAC GGTGAAGGGG CGCTCCGAGA AAGCCCGCTG
CAGCGCCTGA TTGCCGGAGC ATACCCATGA
 
Protein sequence
MNTVTLSITN LDQLQHGVTA RHLFDCKGGT IGSGRANWQI NDRDQTVAPI HCEIRWIEGS 
FCVIDHCHRT YLNGSANSLG PLPPRRLVEG DQLLIGTYRL QVQYTQDQAC TRSLEDLFNP
DPRVLDRLIA EAPAPAWPAQ PSAPQPAVEI CSVFKAAMGN DPLAALDAAD GEGALRESPL
QRLIAGAYP