| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2121 |
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| Symbol | |
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| ID | 5192085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2401755 |
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| End bp | 2402552 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586578 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267444 |
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| Protein GI | 148547342 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.492075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC ATCCACTTCT GCTCGCCACC CTGTTGCTTG CGCTGGTCGT GCCCACCGGC
TGTACCTCTT TGAGCAGAAT GAGCCAGGTG GCCATGGACC ACTCGTTGCC CATCGGGCCG
CCCAAGGATC ACCCGACCGA GGTCGCATTC AGCATCAATG CCAGCCCTAC CCTCAACGGC
AATCCGAACA GCCTTGACGT CGCAGCCGAA CAGGATAGCG CCCTGGAGCC CAGCCCCTAC
GCTGTAACCC TGAGTGCTGG CGACCCCTAT GCGTTGACCG AAAAAATCGG GGTTCTGTTC
GAATACCTGC AAGCGCAATT CCCGGCCATG TCCCCCGTCG AGCTGGACGA AGGAGACGAA
AGCGACCCGG CGCGCTCACC CCAGGAAGAA AGCGGCCCCG GCAGCTACGA CGACCCTCAG
GTGGCGTTGA CCTTGCCGCG CACCACAAGC GTTGCCTCAG CGCTGGTCGC TACGCCCATT
AACATCACGA TCCTGCAACT GCGCGATGAC TCACTGCTGC GCAACACCGT GTACCAGCTA
CTGGAGCAGG ACCCGGCCAA GGCGCTGCGC AGTACCTACA TCCGCAGTGA CGATTACCTG
CTGCGCCCTG GCCAGTTCAA GTACATCCCG TTCGAGCCTA TCCACGCCGA AACCCGCTTC
GTCGCGGTGA TTGCCGATTA CCGAGGGCAT GAAAACGCCA GTTGGCGGCA AGTTCTGCGC
ATTCCGCCGC GTGGCCGCCA GATCATGCTG TCGGTGCTGG TCAACGACAC GCACATCGTG
CTCAAGGAAG AAGACTGA
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| Protein sequence | MKPHPLLLAT LLLALVVPTG CTSLSRMSQV AMDHSLPIGP PKDHPTEVAF SINASPTLNG
NPNSLDVAAE QDSALEPSPY AVTLSAGDPY ALTEKIGVLF EYLQAQFPAM SPVELDEGDE
SDPARSPQEE SGPGSYDDPQ VALTLPRTTS VASALVATPI NITILQLRDD SLLRNTVYQL
LEQDPAKALR STYIRSDDYL LRPGQFKYIP FEPIHAETRF VAVIADYRGH ENASWRQVLR
IPPRGRQIML SVLVNDTHIV LKEED
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