Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2120 |
Symbol | |
ID | 5192084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2400362 |
End bp | 2401699 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586577 |
Product | hypothetical protein |
Protein accession | YP_001267443 |
Protein GI | 148547341 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAC GCAATCCCGT TCTCTGGCCC GAAGGCCTGT TCGTCAAACC ACAGCATTTC CAGCAGGCGA CCAGGGCCAG CGAAGCAGCC CTGCACCAGC GCCTCGCCAG CCTCAACGCA GCCTTCTACG GCTTCAGCGA ACTTCAGTTG AGCGACGAAT ACCTGAGCCT GGGCAAAGTC GCCATCACCC GGGCGCGCGG TGTGATGCCG GACGGCACGG TGTTCGACAT TCCCGCCGAC CTGCCGCCAC CGCCGCCGCT GGAAATCGGC GACGACGCGT GCCAAGACAG TGAGGTGTAT CTGTGCCTGC CGCTGCGTAC CGATGGCGGC CGCGAAGTGA GTTGGCCCGA CAATGCAGCC AATTTCCGCT ATACCGCCCA GGCACAGGAA ATCAAGGATA CCCACACCGC TGACGGCGAC CTGGTGCAGG TAGACCTTGC GGTGCCCAAC CTGCAGCTCA AACGCAAGAC CGAAGACAGC AGCGCCTACA CCCGCCTGGC CCTGGCACGT ATTCTGGAAC GGCGCCCCGA CGGCAGCCTG CAACTGGACG AAGCGTTCTA CCCCACCAGC GTTTCGGTGC GGGCGGTGCC AGCGCTGCAG CGGTTTCTTG AAGAAATCAC CCATACCTTG CGCGAGCGGG CGCGCGGCCT CGCCACGCGG ATTGGTGCCT CGGGCCAGTC CGGGATCGCC GACATTCGCG ACTTCAACCT GCTGCAGGCC ATGAACCGTT GGTGGCCATG CTTCCAGCAT CTGGCCAGGC AAGCGCAAAC GCACCCCGAG CAGCTGTACC TGTGCATGAG CCAGGCCTGC GGCGAATTCG TCACCTTCAC CGACCAGAAC AGGCTGCCGC AGGAGTACCC CGCCTATCAC CACACCGCGC TGCGCACCTC TTTCAAACCA CTGGAAGACA CCTTGCGTCG GTCTCTGAGC ACCGTCTTGC GGCCACGCGC TGTTTCACTA CCGCTGGAGA GCGAACAATT CGGCGTGATG ACGACCACGC TGGAAGACCG CCGGCTGATC GACGAAGCCG ACTTCATCCT CGCCGTGCGC GCCAGCATGC CACCACAGGC GTTGCGCCAG ATGTTCATCC AGAAAGCCAA GATCACCTCG CTTGAGTCAC TGAATGACCT GGTGCCGCTG CAATTGCCGG GCATCCCTTT GTTGCCATTA CCCGTGGCGC CCCGCGACCT GCCCTTCCAT GCGGGCTTCA GCTACTTCGA GCTGGACCGA CGAGACCCGG CCTGGGCGTG CATGAGCAAG GCGAATGGCT TCGGCATCCA CATTGCGGGC GACTTCCCAG GGCTTGAACT GCAGTTCTGG GCGATCAGGA GTGAGTGA
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Protein sequence | MSSRNPVLWP EGLFVKPQHF QQATRASEAA LHQRLASLNA AFYGFSELQL SDEYLSLGKV AITRARGVMP DGTVFDIPAD LPPPPPLEIG DDACQDSEVY LCLPLRTDGG REVSWPDNAA NFRYTAQAQE IKDTHTADGD LVQVDLAVPN LQLKRKTEDS SAYTRLALAR ILERRPDGSL QLDEAFYPTS VSVRAVPALQ RFLEEITHTL RERARGLATR IGASGQSGIA DIRDFNLLQA MNRWWPCFQH LARQAQTHPE QLYLCMSQAC GEFVTFTDQN RLPQEYPAYH HTALRTSFKP LEDTLRRSLS TVLRPRAVSL PLESEQFGVM TTTLEDRRLI DEADFILAVR ASMPPQALRQ MFIQKAKITS LESLNDLVPL QLPGIPLLPL PVAPRDLPFH AGFSYFELDR RDPAWACMSK ANGFGIHIAG DFPGLELQFW AIRSE
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