| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2118 |
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| Symbol | |
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| ID | 5193647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2398843 |
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| End bp | 2399358 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640586575 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267441 |
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| Protein GI | 148547339 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAC CCGCTTACAT CAAGATCGTA GGCCAGACCC AAGGCAACAT CACCGCTGGC
GCCTTCACCG CTGACTCCGT CGGCAACGTG TTCCAACAAG GCCATGAAGA TCAAATTCTG
GTTCAGGAAA TCAAGCATGA GGTGACTACG CCCACTGACC CCCAGAGCGG TCAACCGAGT
GGCCAGCGCG TGCATAAGCC TTTCATATTC ACCAGTTCAC TGAACAAAGC TACCCCCCTG
ATGTATCAGG CACTTGCCAC CGGCGAAATG CTGCCAACGG TCGAAGTCAG CTGGTATCGC
ACCTCGGAGG AAGGCAAGCA AGAGCACTTT TTCACGACCA CGCTAGAAGA CGCCACCATC
GTCAGCATCA ATACCGTGCT TCCCCATGCA CTCGACAAAG ACAATGAAAA CTACACACAA
CTGATTGAAG TATCCCTGGC GTATCGAAAG ATCACGTGGG CTCACGATGT AGCCAATACC
GAAGGTTCTG ACGACTGGCG CAATCCGATC GCCTGA
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| Protein sequence | MPTPAYIKIV GQTQGNITAG AFTADSVGNV FQQGHEDQIL VQEIKHEVTT PTDPQSGQPS
GQRVHKPFIF TSSLNKATPL MYQALATGEM LPTVEVSWYR TSEEGKQEHF FTTTLEDATI
VSINTVLPHA LDKDNENYTQ LIEVSLAYRK ITWAHDVANT EGSDDWRNPI A
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