| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2103 |
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| Symbol | |
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| ID | 5193135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2378662 |
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| End bp | 2380005 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586560 |
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| Product | outer membrane porin |
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| Protein accession | YP_001267426 |
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| Protein GI | 148547324 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.262229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTGCA GATCACCCCT GACACTGGCT GCTTGCCTGG CGCTGGCCGG CGTTGGCAGC
CAGGTTGTTG CTGCAGAAAA AAGTGCGGAC GGCTTCATGG AGGGCAGCAC CCTCAGCGTG
CTTAACCGCA ACTTCTACTT CAACCGCGAT AATCGCGATT CTGTGGCCCC CACACACAAC
CCGAGCAAAC AACCTGACAA CGGCTACTCC GAGGCCTGGG GGCACGCCGT GATTACCCGA
TTCGAGTCGG GCTTCACCCA GGGCACCGTA GGTGTTGGCC TGGATGCGTT TGCCATGCTT
GGCCTCAAGC TCGACACGGG CGGCGGCCGC AACGGCGGGC GCAGTTCTTT CGACGTATTG
CCGGTTGACC GCGACGGCCA GGCGCGTGAC GAATACACCA AGGTGGGGGG CGCGGCCAAG
CTACGACTGT TCGACACGGT ACTGAAGGTG GGTGATGTGT TCCCAGCCAA CCCGGTGGTG
GCGGCTGGCG ACTCGCGGCT GCTGCCGGAA AGCTTCCGTG GGGTGACCCT GGAGAACACC
AGCATCAAGG ACCTTACCCT GCAAGCCGGG CGTCTGCATG CCATGAGCCA GCCGATGTCC
AGCGACCTGC GGGAGAACTT CGTGACCTTC TATGGCGGCC CGGTCGATTC GCCCTGGATC
GCCTATGGTG GGGGGGATTA CAGGCTCAAT GAGCATGTCA GCGTCAGCCT GTTCAGTAGC
CGGCTCAAGG ACGCGTGGAA CCAGTACTAC GCCGGCACCA GCCTGAGTTG GCCACTGAGC
GAGGCGCTGG CGCTGATTGG CGGTTTCAAC TATTACAAGG CTGTGGATGA AGGGCAGCAG
CGCCTGGGCG CCTTTGACAA CGACATCTGG AGCGCCAAGC TGGGTGTGCG CTTTGGTGCT
CACACCCTGG CCCTGACGCA CCAGCGCAAC AACGGCGACG ACGACTTCGA CTACCTGCGC
CAGTCCGACT CGATCTTCCT CGACAACTCC ATCCAGTACA GCGACTTCAA CGCGCCCAAG
GAGCGTTCGT GGATGCTGCG TTATGACCTG AACATGGCCG CCTACGGCGT ACCCGGGTTG
TCGTTCATGA CACGCTACGG CAAGGGTACC GATGCTGACT ACTCCAATGC CAACGCCACC
TACATGCGCC GTGACGTTGC GGGCAACCCG CTGACCGACC AGAAACGCTG GGAGCGTGAC
ATCGAGGTGA AGTATGTGGT GCAGACGGGC GCGGCCAAGG ACCTGTCGTT GCGGGTTCGC
CAGGCCACCA CCCGGGCCAC GGCGTTCGAG TCGGACCTGG ACGAAGTGCG GCTGATCGTG
GAGTACCCGT TGTCGATTCT GTGA
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| Protein sequence | MTCRSPLTLA ACLALAGVGS QVVAAEKSAD GFMEGSTLSV LNRNFYFNRD NRDSVAPTHN
PSKQPDNGYS EAWGHAVITR FESGFTQGTV GVGLDAFAML GLKLDTGGGR NGGRSSFDVL
PVDRDGQARD EYTKVGGAAK LRLFDTVLKV GDVFPANPVV AAGDSRLLPE SFRGVTLENT
SIKDLTLQAG RLHAMSQPMS SDLRENFVTF YGGPVDSPWI AYGGGDYRLN EHVSVSLFSS
RLKDAWNQYY AGTSLSWPLS EALALIGGFN YYKAVDEGQQ RLGAFDNDIW SAKLGVRFGA
HTLALTHQRN NGDDDFDYLR QSDSIFLDNS IQYSDFNAPK ERSWMLRYDL NMAAYGVPGL
SFMTRYGKGT DADYSNANAT YMRRDVAGNP LTDQKRWERD IEVKYVVQTG AAKDLSLRVR
QATTRATAFE SDLDEVRLIV EYPLSIL
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