| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2024 |
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| Symbol | |
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| ID | 5190451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2287695 |
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| End bp | 2288948 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586482 |
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| Product | outer membrane porin |
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| Protein accession | YP_001267348 |
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| Protein GI | 148547246 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.68601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACA CAACTTGCAC GCTGGCCCGT TCGGCCCTGG CAGTTTCGTT GGCGTTTGGC
CTTGGTTTGC CGGCCTGGGC GCAAGAGGGG GGCTTCTTTG AAGATGCCAA GGGTGGGCTG
ACACTGCGCA ACTACTACTT CAACCGCGAT TTCCGCGACC CGGGGGCCGC CAAGGTCAAG
GTTGAAGAAT GGGCCCAGGG TTTCATCTTC AAGTTCAGCT CGGGCTACAC CCCGGGGCTG
ATCGGTTTTG GCCTGGATGG TATCGCCCTG TTCGGCGTGA AGCTGGACAG CGGCGGCGGT
ACCAGCGGCT CAGAACTGTT GCCGGTGCAC GATGACGGGC GAGCGGCCGA CGACTACGGT
CGGGCCGGGC TGGCGGCGAA GCTGCGTATG TCTGCGACCG AGCTGAAGGT GGGGGAGTTG
TTGCCGGATA TTCCACTGCT GCGTTACGAC GATGGCCGCC TGCTACCGCA GACTTTCCGT
GGTGCCATGC TCGACTTGCG GGAAATCGAA GGCCTGAGCC TGCAGGCCGG CCAGTACCGC
GAGGTGAGCC TGCGCCACTC TTCGGACATG CAGGACCTGT CTGCCTGGGC GGCGCCCGGG
GTCACCTCGG ACGGCTTCAA CTACGCCGGC GCCGAGTACC GCTTCAACCA GCAGCGAACA
CTGATCGGCG CCTGGCACTC GCAGTTGGAG GACATCTACC AGCAAAGCTA CTTCAACCTG
CTGCACAGTC AGCGGGTAGG GGAGTGGACG TTGGGGGCCA ACCTTGGCTA CTTCATCGAC
CGGGATGACG GACAGGCGCG CATCGGCGAC ATCCAGAGCC GCACCGGCTA CGCCTTGTTG
TCAGCTTCGC ACAGTGGCCA CACGCTGTAC CTGGGGTTGC AGAAGGTCAG TGGCGACAGT
CAGTGGATGT CGGTGTACGG CAGCAGTGGG CGAACCCTGG GCAACGACAT GTTCAACGGC
AACTTCAGCA ATGCTGACGA GCGTTCGTGG CAAGTGCGTT ACGACTACAA CTTTGCCGCG
CTCGGTGTGC CAGGGCTGCT GGCCATGGTG CGGTACGGGC ATGGCGAGAA CGCCACCACG
GCGGCGGGCA GCAATGGCAA GGAGTGGGAG CGCGATACCG AGGTGAACTA CACCTTCCAG
AGTGGGTTAT TGAAGAACCT CAACATCCGG CTGAACAACG CGACCAACCG GCGCAGCTTC
AACAGCGATT TCGACCAGAC GCGACTGATC GTCAGCTACC CGCTGACCTT GTAG
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| Protein sequence | MMDTTCTLAR SALAVSLAFG LGLPAWAQEG GFFEDAKGGL TLRNYYFNRD FRDPGAAKVK
VEEWAQGFIF KFSSGYTPGL IGFGLDGIAL FGVKLDSGGG TSGSELLPVH DDGRAADDYG
RAGLAAKLRM SATELKVGEL LPDIPLLRYD DGRLLPQTFR GAMLDLREIE GLSLQAGQYR
EVSLRHSSDM QDLSAWAAPG VTSDGFNYAG AEYRFNQQRT LIGAWHSQLE DIYQQSYFNL
LHSQRVGEWT LGANLGYFID RDDGQARIGD IQSRTGYALL SASHSGHTLY LGLQKVSGDS
QWMSVYGSSG RTLGNDMFNG NFSNADERSW QVRYDYNFAA LGVPGLLAMV RYGHGENATT
AAGSNGKEWE RDTEVNYTFQ SGLLKNLNIR LNNATNRRSF NSDFDQTRLI VSYPLTL
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