Gene Pput_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2001 
Symbol 
ID5195292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2262168 
End bp2262518 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content61% 
IMG OID640586459 
Productresponse regulator receiver protein 
Protein accessionYP_001267325 
Protein GI148547223 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.002906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACCTTC TGGTAGTCGA AGACGACGAC ATCGTACGTA TGCTGACGGT CGAAGTGCTC 
GACGAGTTGG GCTACAAGGT CATCGAGGCA GAAGACGCCA CAGCCGCCCT GCGTGTACTT
GAAGACCCAA GCCAGGCGCT GGCACTGATG ATGACCGATG TGGGGCTCCC GGACATGCGA
GGTGAGGTGC TGGCGGGCAA AGCGCGCGAA CTGCGGCCGC TATTACCGGT GCTGTTCGCC
AGCGGTTACG CCGACAGCCT CACGGTACCG GAGGGCATGC ACCTGATCGG CAAGCCGTTC
AGCATCGACC AGTTGCGGGA CACGGTGGTG GGTATTCTGG GTAACCCTTG A
 
Protein sequence
MHLLVVEDDD IVRMLTVEVL DELGYKVIEA EDATAALRVL EDPSQALALM MTDVGLPDMR 
GEVLAGKARE LRPLLPVLFA SGYADSLTVP EGMHLIGKPF SIDQLRDTVV GILGNP