| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1979 |
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| Symbol | |
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| ID | 5195572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2244200 |
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| End bp | 2245156 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640586438 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267304 |
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| Protein GI | 148547202 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00673932 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGCTT TTCACGGGCT CGGGCAGAAG ATCAAATTAG GAGCAACTGT TGGCCAAGAA
TGTATGAGCG GTATTGAATG GGAAAGCCAG CGTGTATTTC TCGCCGTGTT GCGCTCTGGT
AGCCTGAGCG GCGCGGCGAA GCTGCTGGGT ATCGCCCAGG CCACTGCGCG CCGGCGCCTC
GACTGTCTTG AACACGCTCT CGGTGTGAGT CTGTTCACCC GCACACCTCA AGGACTGACG
CCTACTGCCG GAGCGCAGCG CCTGATCGAA CATGTGGAGG CCATGGATCT GGCCGCGCAA
ACCTTCAACC GCATGGCCAG CTCTGAAGCG TCGATGGATC ACGGTACAGT CCGGCTGACC
TGTGGCGAGT TGCTTGGCGT CGAAGTCTTG CCCGACCTGC TGCGCCCTTT CCATTACGAA
CACGTCGGAC TCAAACTTGA GCTGAGCATA AGCGATGCCC TTGAAGACAT CGCCAGGCTG
CAATCGGATA TTGCGGTGCG GCTGATGCGG CCCAATGAAG CGGATATCAC GGTGCGGCGT
GTCGGCAGTT TGCAGATTGG CATCCATGCC AGTGCCGGGT GCCTGGAGCG CTACGGTAAC
CCAACCTCCC TGCTGTCGCT GCGCCAGCGA CCGCTGATCG GGCCAGACAG ACGCTCAGCG
GATTTGCGTC GGTTTATCGA CTCTGGTCTG TGCGATGCCG ACCAGCATTT CGCCATTGCC
TCTGATCATC ACCTTGCTCA GCTGGCCGCT CTGAGAGCGG GCTTAGGCTT CGGGCTCTGC
CCGACTCAAA TCGCAAAATC GCACGGACTG GTACATGTGC TACCACACGA TTTTGGCTTT
GAGGTTGAGG TGTGGATCGC AATGCACAAT GACCTGCGCA AAATTAACAG GATCGCTCAG
GCGTTCGAGG TTCTTGGAGA GCAGTTACAT CAGTATCTAT GCTTAGCCGA TCAGTGA
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| Protein sequence | MIAFHGLGQK IKLGATVGQE CMSGIEWESQ RVFLAVLRSG SLSGAAKLLG IAQATARRRL
DCLEHALGVS LFTRTPQGLT PTAGAQRLIE HVEAMDLAAQ TFNRMASSEA SMDHGTVRLT
CGELLGVEVL PDLLRPFHYE HVGLKLELSI SDALEDIARL QSDIAVRLMR PNEADITVRR
VGSLQIGIHA SAGCLERYGN PTSLLSLRQR PLIGPDRRSA DLRRFIDSGL CDADQHFAIA
SDHHLAQLAA LRAGLGFGLC PTQIAKSHGL VHVLPHDFGF EVEVWIAMHN DLRKINRIAQ
AFEVLGEQLH QYLCLADQ
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