| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1976 |
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| Symbol | pbpG |
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| ID | 5190202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2242180 |
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| End bp | 2243106 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586436 |
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| Product | D-alanyl-D-alanine endopeptidase |
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| Protein accession | YP_001267302 |
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| Protein GI | 148547200 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00633219 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAACAT CCCTGTCCAT CCTCAGCCTG CTGCTGTTGC TCACAGGTAC CGCGACCCTT
CCGTCGACTG CTGCTGCACA ACCCCCGGCC CAGGTTCAAC GTGACCCCTC CAAACTGCAT
CTGGCTTCAG GCAGCGCTCT GCTGATCGAC CTGAACAGCA ACCAAGAGCT GTATTCAAGC
CATGCCGACC GCGTGGTGCC GATCGCTTCG GTGACCAAAC TGATGACGGC GATGGTGGTG
CTGGATGCCA AGTTGCCCAT GGATGAAATG CTCACCATGA CCATTGCCAA CAACCCGGAG
ATGAAAGGCG TGTACTCGCG CGTGCGCCTG GGCAGCCAGC TGGACCGCCG CGAAACCCTG
CTGATTACCC TGATGTCGTC GGAAAACCGT GCGGCCAACA GCCTGGCCAA CGCCTACCCC
GGCGGCTATC CGGCGTTCAT CAAGGCAATG AATGCCAAAG CCCGCAGCCT GGGAATGGCC
CACACCCGCT ATGTTGAGCC GACTGGCCTG TCGACGCAGA ACGTATCCAC TGCCCGCGAC
CTGGCCAAGC TGCTGATGGC CTCGCGCAAG TACCCCATGC TGAGTGAGCT GTCGACCACC
CGCGAAAAGA CCGTCGCCTT CCGCAAGCCC AACTACACCC TGGGCTTCCG TAACACCGAC
CACCTGGTGA ACAAAAGCAA CTGGGATATC AAGCTGACCA AGACCGGCTT CACCAACGAG
GCCGGGCACT GCCTGGTATT GCTGACCCGC ATGGATAACC GCCCGGTGGC CATGGTCATT
CTCGATGCCT TCGGTAAGTA CACCCACTTC GCCGATGCCA GCCGCATGCG TCAATGGCTG
GAAACCGGTG CCGCCAAGCC GGCACCGGCA GTGGCCATGC AGTACAAGGC CGACCGGCAG
AACAAGGGGC GGTTGGCGGC CGAATGA
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| Protein sequence | MKTSLSILSL LLLLTGTATL PSTAAAQPPA QVQRDPSKLH LASGSALLID LNSNQELYSS
HADRVVPIAS VTKLMTAMVV LDAKLPMDEM LTMTIANNPE MKGVYSRVRL GSQLDRRETL
LITLMSSENR AANSLANAYP GGYPAFIKAM NAKARSLGMA HTRYVEPTGL STQNVSTARD
LAKLLMASRK YPMLSELSTT REKTVAFRKP NYTLGFRNTD HLVNKSNWDI KLTKTGFTNE
AGHCLVLLTR MDNRPVAMVI LDAFGKYTHF ADASRMRQWL ETGAAKPAPA VAMQYKADRQ
NKGRLAAE
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