Gene Pput_1957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1957 
Symbol 
ID5193001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2227636 
End bp2227929 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content63% 
IMG OID640586418 
Producthypothetical protein 
Protein accessionYP_001267284 
Protein GI148547182 
COG category[S] Function unknown 
COG ID[COG5470] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0569002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.325909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCT ACTGGATCGC CCATGTGGAT GTGACCGACC CCGAGCAGTA CCAGCAATAC 
ACCCAGCGCG CCCCGGCTGC CTTCAAGGCA TTCGGCGGGC GCTTCCTGGC CCGTGGCGGG
CGTAGCGAGG CGATGGAAGG GAGAGCTACG CCTCAGCGTA GTGTGGTGAT CGAGTTCGAT
TCGTACGCGC AGGCCGTCGC CTGTTACCGC TCCGCGCTGT ACCAAGAGGC ATGCAGTCAT
CGCCAAGGGG TGGCGAAGGC TGAGGTGATC ATTGTGGAAG GGTTTGAGCC CTGA
 
Protein sequence
MKAYWIAHVD VTDPEQYQQY TQRAPAAFKA FGGRFLARGG RSEAMEGRAT PQRSVVIEFD 
SYAQAVACYR SALYQEACSH RQGVAKAEVI IVEGFEP