Gene Pput_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1930 
Symbol 
ID5191398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2203197 
End bp2203568 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content56% 
IMG OID640586390 
ProductMerR family transcriptional regulator 
Protein accessionYP_001267257 
Protein GI148547155 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.127523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATTG GAGAGTTGGA GCGCCGGAGT GGGCTCAGTC GCCATGCATT GCGCTATTAC 
GAACAGCTCG GGCTTATCGA GCCACACCGA CAAGCCAACA ACTATCGCAG TTACAGTGAA
CAGACCGTTG CTGACTTGGC TTTCATACAG AGTGCCCAGG GCGGGGGCTT TTCACTTGCT
GAGATTGGGG ACATTCTTGT GGCCAGGCGG GGGAACACGA TCGATTGCGC GCAAGGCGCC
GTCTTGGTCG CCGCCAAGAT GGCCGAGATT CAAACGAAGA TCACCACGCT ACAGGCCGCT
TATGTTTTTC TGGACGCGGA GCACGCCAAG CTTGAAGCCA GTGCTATTGC CAACGGGCAG
ATAATGCCTT GA
 
Protein sequence
MNIGELERRS GLSRHALRYY EQLGLIEPHR QANNYRSYSE QTVADLAFIQ SAQGGGFSLA 
EIGDILVARR GNTIDCAQGA VLVAAKMAEI QTKITTLQAA YVFLDAEHAK LEASAIANGQ
IMP