| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1913 |
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| Symbol | |
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| ID | 5193729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2187703 |
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| End bp | 2188722 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586377 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001267245 |
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| Protein GI | 148547143 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.786378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTTTC TTGCCGAATA CGCAAGCTTT CTCGCCAAAA CCGCCACCCT GGTCATCGCC
ATATTGGTGG TGCTGTCGGC GATCGCCGGG CTGCGTGGCA AAGGTCGGCG CAAATCGGGC
GGGCAATTAC AGGTCACCCG GCTGAACGAT TTTTACAAGG ACCTGCGTGA GCGCCTGGAG
TCCGGCTTGC TCGACAAGGC CCAGCTCAAG GCCCTGCGCA AGCAGCAGGC CAAGGCGGAA
AAACAGCAGA AGAAGGGCAA GGCCGAGGAC AAGAGCCGGG TATTCGTACT GGACTTCGAT
GGCGACATCA AAGCCTCAGC CACCGAAAGC CTGCGCAACG AAATCACTGC GCTGCTGACG
CTCGCCACCG CGCGTGACGA AGTGGTACTG CGCCTGGAAA GCGGCGGTGG CCTGGTGCAC
AGTTACGGCT TGGCTGCGTC GCAACTGGCG CGTATTCGCC AGGCGGGCAT CCCGTTGACC
GTGTGTATCG ACAAGGTGGC TGCCAGCGGT GGGTACATGA TGGCCTGCAT CGGCGAGAAG
ATCGTCAGTG CCCCATTCGC CGTACTGGGG TCTATTGGCG TGGTGGCGCA GTTGCCCAAC
GTCAACCGCC TGCTGAAAAA ACACGACATC GACTTCGAAG TGCTGACTGC TGGCGAATAC
AAGCGCACCC TGACCGTCTT TGGCGAAAAC ACCGAGAAGG GCCGGGAGAA GTTCCAGGAA
GACCTGGACA TCACTCACCA GTTGTTCAAG GATTTCGTTT CCCGCTATCG TCCGCAGTTG
CACATCGATG AAGTGGCCAC TGGCGAAGTC TGGCTGGGCG TGGCCGCCTT GAATCGCAAG
CTGGTTGACG AGTTGCAGAC CAGTGACGAG TACCTGAGCG AGCGCGCACG CAACGCCAAC
CTGTTCCACC TGCACTATGC CGAACGCAAG AGCCTGCAGG AGCGGATTGG CATGGCCGCC
AGCGGTACCG TGGAGAACGC GGTGGTGGGC TTGTGGAGTA AACTCAGCCG CCTGCGCTAA
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| Protein sequence | MEFLAEYASF LAKTATLVIA ILVVLSAIAG LRGKGRRKSG GQLQVTRLND FYKDLRERLE
SGLLDKAQLK ALRKQQAKAE KQQKKGKAED KSRVFVLDFD GDIKASATES LRNEITALLT
LATARDEVVL RLESGGGLVH SYGLAASQLA RIRQAGIPLT VCIDKVAASG GYMMACIGEK
IVSAPFAVLG SIGVVAQLPN VNRLLKKHDI DFEVLTAGEY KRTLTVFGEN TEKGREKFQE
DLDITHQLFK DFVSRYRPQL HIDEVATGEV WLGVAALNRK LVDELQTSDE YLSERARNAN
LFHLHYAERK SLQERIGMAA SGTVENAVVG LWSKLSRLR
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