Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1881 |
Symbol | |
ID | 5194502 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2155312 |
End bp | 2156226 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586345 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001267213 |
Protein GI | 148547111 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.637669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCA ACATATCTTC TACCGAATCT ACCGCCAAGC GGCAGGCCGA TGCCCCGGCG TCCAGCCTTG AGGCCCTTGG CAAAAGCAGC CTGCGGGTGT TGCGCCTGCT GGTCCGCAAC CCTATGACCC TGGCGGGCTT GCTGGTGGCC TTGCTGCTGG TCGTGGTAGC GGCCTTCGCG CCGTGGATCG CCACCCACGA CCCGGTCATC CAGAACCTCG CCAACGCCTT GCAGGCACCC AGTGCCGCGC ACTGGTTCGG TACCGACGAA TACGGCCGGG ATATCTTCAG CCGGCTGGTC TATGGCGCGC GTATCACCCT CTACATCATC GCCCTGGTGA CGGTCATCGT CGGCCCGATC GGCCTGTTCA TCGGCACGGT ATCGGGCTAC TTCGGCGGCA TTGTCGATAC CGTGTTCATG CGCGTCACCG ACATTTTCAT TTCGTTCCCC AGCCTGGTGC TGGCGCTGGC CTTCATCGCC GCATTGGGCC CTGGCCTTGA GCATGCGGTG GTGGCTATTG CGTTAACCTC CTGGCCACCG ATCGCACGGC TGGCCCGGGC CGAAACCCTG TCGCTGCGCA AGGCCGACTT CGTGGTGGCG GTCGAACTGC AGGGCGCGTC TTCGACACGC ATCATCCTGC GCCATATCGT GCCGATGTGC CTGTCGTCGG TGATCATCCG CCTGACCATG AACATGGCCG GCATCATCCT TACCGCGGCG GCGCTGGGCT TCCTCGGGCT AGGGGCGCAG GCGCCATTGC CGGAGTGGGG GGCGATGATC TCCACGGGGA GGCGCTACAT GCTCGAGTGC TGGTGGCTGG TAGCCGTACC CGGTGCGGCA ATCATGTTGG TGAGCCTGGC GTTCAACCTG CTGGGCGATG GCCTGCGGGA CATTCTCGAC CCGCGTAGCG AGTAA
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Protein sequence | MIANISSTES TAKRQADAPA SSLEALGKSS LRVLRLLVRN PMTLAGLLVA LLLVVVAAFA PWIATHDPVI QNLANALQAP SAAHWFGTDE YGRDIFSRLV YGARITLYII ALVTVIVGPI GLFIGTVSGY FGGIVDTVFM RVTDIFISFP SLVLALAFIA ALGPGLEHAV VAIALTSWPP IARLARAETL SLRKADFVVA VELQGASSTR IILRHIVPMC LSSVIIRLTM NMAGIILTAA ALGFLGLGAQ APLPEWGAMI STGRRYMLEC WWLVAVPGAA IMLVSLAFNL LGDGLRDILD PRSE
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