Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1868 |
Symbol | |
ID | 5194826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2138951 |
End bp | 2140312 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586333 |
Product | Na+/H+ antiporter NhaA |
Protein accession | YP_001267201 |
Protein GI | 148547099 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3004] Na+/H+ antiporter |
TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.138297 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAAAG TAGAATTACC TCGCGCCCAG AAACTGGCTG AGCGCGCCTT CGCCAACCTT GAACGCTTTT TGCACATTGA AGCGGTCAGC GGCATCGTTC TGTTGATTGC CGCAGTCGCT GCCCTGATCT GGGCCAATTC CCCGGCTGCC GACAGTTATG AAGCCCTTTG GCATACGCCG TTGACGTTCG GCGTGGGCTC GCATGTCTAT TCGCAGTCCC TGCATTTCTG GATCAATGAT GGCCTGATGA CCATCTTTTT CCTGGTCGTG GGCATGGAGA TCCGCCGCGA AATCCACGAG GGTGCACTGT CCAGCCTGCG CCAAGCCACA CTCCCCATGG CAGCCGCTGT CGGCGGCGTA GCGGTACCCG CACTCCTCTA CCTGAGTTTT GGTCACGCGT CGGCAGACCA GCAAGGCTGG GCCGTGCCAA CGGCGACGGA TATCGCCTTT GCGGTGGGCG TATTGGCCCT GCTCGGCAAG TCGATCCCGT CCAACGTACG TGTGTTCCTC CTCGCCCTGG CAATCATCGA TGACATCATC GCAGTCCTGA TCATCGCGTT CTTCTACTCA GGCGGCCTTG ATTACACCGG TTTCGGCGTT GCACTGATCG GCCTGCTAAT GGTGATCGGG CTTCAAAAGA TCGGTGTGGG TTCAGCCTAC GCCTACGTCC TTCCCGGTGC GATCGTCTGG CTGGGCATCT TGTTGACCGG CGCCCACCCG ACCCTCGCAG GCGTCGTGCT GGGCCTGATG ACACCTGTCA CCGCAATGCC GATGCGTGAG CGCCCACTGG ATGCCATTAC CCGCTTCACC GGCGAATTGC TGGGGCGCGC CAAGGCGCCT GAGCAAGATG CCAGCGACCT CATGGACCCG TTGAAACGAC TGCGCCTGGC CCAGCGCGAA CTGCTGCCGC CGGTGGTGCG CATGCAAGGT ACCCTGCACC CCTGGGTAGC CTTCGGCATC ATGCCGGTGT TTGCCTTGGC CAACGCCGGG GTCAGCCTTT CGGGTGTCGA CCTGTCCGTT GAAGGCCCCC AGTGGGTCAT GATCGCCGTC GCTGTCGCCC TGGTAGCAGG AAAGCCGTTG GGCATCGTCA GCGTCAGCTG GCTGATGGTC CGCCTGGGCT GGTGCGTGCT TCCCGCCGAG ATCAACTGGC GTAGCATTGT CCTGGTCGGG CTGCTGGCCG GTATCGGTTT CACCATGTCG ATCTTCATCG CCAACCTCGC GTTCGTCGAC CCTGGCTCAC TTGGGGCAGC GAAACTCGGC GTGCTATCCG CGTCGTTGAT CGCGGCCGTG CTGGGTTTGA CCTGGGGGGT GTGGAGCCTG CGTAGCACAG CGTCTGCTAC CAAAGCAGGT TCGCCCACCT AG
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Protein sequence | MHKVELPRAQ KLAERAFANL ERFLHIEAVS GIVLLIAAVA ALIWANSPAA DSYEALWHTP LTFGVGSHVY SQSLHFWIND GLMTIFFLVV GMEIRREIHE GALSSLRQAT LPMAAAVGGV AVPALLYLSF GHASADQQGW AVPTATDIAF AVGVLALLGK SIPSNVRVFL LALAIIDDII AVLIIAFFYS GGLDYTGFGV ALIGLLMVIG LQKIGVGSAY AYVLPGAIVW LGILLTGAHP TLAGVVLGLM TPVTAMPMRE RPLDAITRFT GELLGRAKAP EQDASDLMDP LKRLRLAQRE LLPPVVRMQG TLHPWVAFGI MPVFALANAG VSLSGVDLSV EGPQWVMIAV AVALVAGKPL GIVSVSWLMV RLGWCVLPAE INWRSIVLVG LLAGIGFTMS IFIANLAFVD PGSLGAAKLG VLSASLIAAV LGLTWGVWSL RSTASATKAG SPT
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