| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1844 |
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| Symbol | |
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| ID | 5192720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2114710 |
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| End bp | 2115477 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640586312 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001267180 |
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| Protein GI | 148547078 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0017919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTACG CAGACAAGAA AATCGCCGTG GTTACAGGCG GTGCGATGGG TATCGGTGCT
GAAGCTGCCG TTTCACTGGC AAAGGACGGG CATCATGTCG TCATTTGTGA CATCAACGTC
GACGCGGCTG AGCAATTTTC GCGACAGCTC CGTGCGGAGG GCTTCACAGC TGACGCGTGC
CAGGTAGATG TAGCCTCGGT GGAGTCTGTA AGAGATGCAT TTTCTTGGAT CGATAGCGAG
TTCGGCAGAT GCGATGTGCT GGTGAATTCC GCAGGCATCG CCAAGACCAT GCCGTTCCTG
GAGTTTGATC TAGACGTTTT CAACAAGACC ATGCACATCA ACGTCACTGG CACGTTCATG
TGCTGCCAAC TCGCCGCTCA AATCATGCGG AAAAATGGGT TCGGCAGAAT CATCAACATC
GCGTCGGTCG CTGGTATGCG TGCCGTGGGT AAGGGGCGAA CCGCTTACGG TACCTCTAAA
GGTGCAGTCA TTGCGTTGAC CCGGCAGATG GCTGTGGAAC TCAGCGAATA CGGGATCACT
GCTAACGCTA TTGCGCCGGG CCCGGTCGAT ACCCCGATGA CCAAGGAGTT GCACAGCGAC
ACCTTCCGCC AGGCTTATAG CAATGCTATT CCGGCTAAGC GCTACGGAAC GACTCAAGAA
ATTGCCGGCG CAGTTAGCTA TCTGGCATCT GACGTAGCCG CTTACGTGAA TGGTGTTGTG
CTGCCTGTGG ATGGCGGGTT CCTGGCCTGG GGCGCAGGCG ACCTGTAA
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| Protein sequence | MKYADKKIAV VTGGAMGIGA EAAVSLAKDG HHVVICDINV DAAEQFSRQL RAEGFTADAC
QVDVASVESV RDAFSWIDSE FGRCDVLVNS AGIAKTMPFL EFDLDVFNKT MHINVTGTFM
CCQLAAQIMR KNGFGRIINI ASVAGMRAVG KGRTAYGTSK GAVIALTRQM AVELSEYGIT
ANAIAPGPVD TPMTKELHSD TFRQAYSNAI PAKRYGTTQE IAGAVSYLAS DVAAYVNGVV
LPVDGGFLAW GAGDL
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