| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1821 |
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| Symbol | |
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| ID | 5194090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2090547 |
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| End bp | 2092850 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586289 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001267158 |
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| Protein GI | 148547056 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.111465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTGC CAGGGCGATG CGCCTACCCT GCGCACCACG AGACTCGAGC ACGCTCAGCA
CACAGAGAGT TAACCCGCAT GCCCACCCGT TCCAAGATCA TCTATACCTT CACCGACGAA
GCCCCCGCCC TCGCCACTTA CTCGCTGCTG CCGATCATCG AAGCGTTCAC CGCTTCGGCT
GACATCGCTG TCGAAACTCG CGACATCTCC CTGGCTGGCC GTATCCTTGC CGCCTTCCCG
GAGCAACTGG GCGCAGAGAA GCAAGTAGGC GATCACCTGG CGGAACTGGG CCAGCTGGCT
ACCACCCCTG AAGCCAACAT CATCAAGCTG CCGAACATCA GCGCCTCGGT ACCGCAGCTC
AAAGCCGCGA TCAAGGAACT GCAAGGCAAG GGCTTCAACA TCCCTGACTA CGCCGACGAG
CCGGCCACCG CGGAAGAAAA AGAATCCCGT GCCCGCTACG ACCGCATCAA AGGTTCCGCC
GTGAACCCGG TGCTGCGCGA AGGCAACTCC GACCGCCGCG CGCCACTGTC GGTCAAGAAC
TACGCCCGCA AGCACCCACA CAAGATGGGC GCCTGGGCCG CCGACTCCAA GTCGCACGTT
GCCCACATGA CTCAAGGCGA CTTTTACGGC AGCGAAAAAG CCGCGCTGAT CGAAGCTGAC
GACAGCCTGC GCATCGAGCT GGTCGCCAAA GACGGCAGCA CCACCGTGCT GAAAGAAAAA
ACCGCCGTCA AAGCCGCTGA AGTCATCGAC TGCGCCACCA TGAGCCGCAA GGCCCTGAAA
GCCTTCATCG CCGAGCAGAT CGCCGATGCC AAGGCCGCCG GCGTGCTGCT GTCGGTGCAC
CTGAAAGCCA CCATGATGAA GGTCTCCGAC CCGATCATGT TCGGCGTCAT CGTCGAAGAG
TTCTACAACG ACGTGCTGAC CAAGCACGCC GCTGCCCTGG CCGAAGTAGG CTTCAACGCC
AACAACGGTA TCGGCGACCT GTACGCCCGC ATCAAGGACC TGCCAGCTGA CAAGCAGGCC
GAGATCGAAG CCGACATCCA GGCCCTGTAC GCCGAGCGAC CGGCCCTGGC CATGGTCAAC
TCCGACAAAG GCATCACCAA CCTGCACGTG CCGAGCGACG TGATCGTCGA CGCCTCGATG
CCGGCCATGA TCCGTGACTC GGGCAAGATG TGGAACACCG CAGGCGAACT GCAAGACGCC
AAGGCCGTGA TCCCGGACCG CTGCTACGCC GGCATCTACC AGGCCACCAT CGAAGACTGC
AAGGTCAACG GTGCCTTCGA CCCGACCACC ATGGGCAGCG TGCCGAACGT TGGCCTGATG
GCGCAAAAAG CCGAAGAGTA TGGCTCCCAC GACAAGACCT TCCAGGTCAA GGCTGACGGC
GTGGTTCGTG TAGTCGATGG CAAGGGCAAC GTGGTGCTGG AGCAGAACGT CGAAGCCGGT
GACATCTTCC GTATGTGCCA GACCAAAGAC GCGCCGATCC AGGACTGGGT CAAGCTGGCC
GTCAACCGTG CCCGCCTGAG CAACACCCCG GCGGTGTTCT GGCTGGACCC GGCTCGCGCC
CACGACGGCG TCATGATCGA GAAGGTGCAG AAGTACCTGA AAGATCACGA CACCACCGGC
CTGGACATCC GCATCCTGGC ACCGGTCGAC GCCATTAAGT TCTCCCTGGC CCGCATCCGC
GAAGGCAAGG ACACCATCTC GGTGACCGGC AACGTGCTGC GTGACTACCT GACCGACCTG
TTCCCGATCA TGGAGCTGGG CACCAGCGCC AAGATGCTGT CGATCGTACC GCTGATGAGC
GGCGGTGGCC TGTTCGAAAC CGGCGCCGGC GGTTCGGCTC CGAAGCACGT GCAACAGCTG
GTTGAAGAGA ACTTCCTGCG TTGGGATTCG CTGGGTGAAT TCCTGGCCCT GGCCGCTTCC
CTGGAGCACC TGGGCAACAC CTACGACAAC CCGCGCGCCA AGGTTCTGGC CAACACCCTG
GACCAGGCTA CCGGCAAGTT CCTCGACACC AACAAGTCGC CGTCGCGCAA AGTCGGCGGT
ATCGACAACC GCGGCAGCCA CTTCTACCTG ACCCTGTACT GGGCCGAAGC CCTGGCTGCT
CAGACGGACG ACGCTGCCCT GCAGGCACGC TTCGCACCAC TGGCAAAAAC CCTGGCCGAG
AACGAAGCGA CCATCGTCGC CGAGCTCAAC GCCGTTCAGG GCAAGCCAGC CGACATCGGC
GGCTACTACG CCCCGGATGC CGAGTTGACC GCCAAGGTGA TGCGCCCAAG CCAGACCCTG
AACAGCGCCA TCGCTGCCCT GTAA
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| Protein sequence | MALPGRCAYP AHHETRARSA HRELTRMPTR SKIIYTFTDE APALATYSLL PIIEAFTASA
DIAVETRDIS LAGRILAAFP EQLGAEKQVG DHLAELGQLA TTPEANIIKL PNISASVPQL
KAAIKELQGK GFNIPDYADE PATAEEKESR ARYDRIKGSA VNPVLREGNS DRRAPLSVKN
YARKHPHKMG AWAADSKSHV AHMTQGDFYG SEKAALIEAD DSLRIELVAK DGSTTVLKEK
TAVKAAEVID CATMSRKALK AFIAEQIADA KAAGVLLSVH LKATMMKVSD PIMFGVIVEE
FYNDVLTKHA AALAEVGFNA NNGIGDLYAR IKDLPADKQA EIEADIQALY AERPALAMVN
SDKGITNLHV PSDVIVDASM PAMIRDSGKM WNTAGELQDA KAVIPDRCYA GIYQATIEDC
KVNGAFDPTT MGSVPNVGLM AQKAEEYGSH DKTFQVKADG VVRVVDGKGN VVLEQNVEAG
DIFRMCQTKD APIQDWVKLA VNRARLSNTP AVFWLDPARA HDGVMIEKVQ KYLKDHDTTG
LDIRILAPVD AIKFSLARIR EGKDTISVTG NVLRDYLTDL FPIMELGTSA KMLSIVPLMS
GGGLFETGAG GSAPKHVQQL VEENFLRWDS LGEFLALAAS LEHLGNTYDN PRAKVLANTL
DQATGKFLDT NKSPSRKVGG IDNRGSHFYL TLYWAEALAA QTDDAALQAR FAPLAKTLAE
NEATIVAELN AVQGKPADIG GYYAPDAELT AKVMRPSQTL NSAIAAL
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