Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1805 |
Symbol | |
ID | 5193792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2073021 |
End bp | 2073980 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586273 |
Product | ribonuclease Z |
Protein accession | YP_001267142 |
Protein GI | 148547040 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | [TIGR02651] ribonuclease Z |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.426345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTGC TGTTCCTCGG CACCTCCGCC GGGGTGCCCA CCAAGGCACG CAATGTCAGC GCCACAGCTG TGATCGAAGC CAGTGGCAGC CACTGGTATC TGGTCGATTG CGGCGAAGGC ACCCAGCACC GCCTGCTGCA CACCCCGCTT TCGATCCGCG ACCTGCGCGC GATCTTCATC ACCCACGTGC ATGGTGACCA TTGCTTCGGC CTGCCCGGCC TGCTGGCCAG CGCGGGCATG AGCGGGCGCA CCCAGCCGCT GGAAGTGATC CTGCCCGCCG TACTGCACGA TTGGGTACGC CAGGGCCTGG TTGCCAGCGA CACCTTCCTG CCGTTCGAGC TACGCCTGTT GCCCGTGGAA GCGCTGATCG CATGGCGCAG CGAGACCCTG CAGGTGACCA CCGTGCAACT GTCGCACCGG GTGCCCAGCG TGGGTTTCGT ATTCACCGAA ATCAACCCTG AGCCACGCCT GGACATCCAG CGCCTGGACG CCGAGGGCAT ACCGCGTGGT CCGCTGTGGG GCGAGCTGGC CAAGGGGTTG ACCGTGACGT TCAACGGGCA ACTGCTGAAC GGCAACGACT ACCTGCGCCC TTCGCGTCCG CCCCAGCGGG TGATCGTGTG CGGGGACAAC GACAAACCAG CGCTGCTGGC AGCCGTCGCC AGGGGGGCGG ATGTACTGGT GCACGAAGCC ACCTTCACCC AGGCGGTGGT CGAACGCACC GGGGGCACGT TCGGCCACAG CACCGCCGCT GAGGTGGCAC GCTTTGCCGA GGCCGCTGGC GTGCGCAACC TGGTACTGAC GCATTTCAGC GCCCGCTACC AGAACGACCC ACGGCGCAGC CCGCACATCG ACACCGTGCG CGACGAGGCC CTCGCCCATT ACAGCGGGCA GTTGACCCTG GCGCAGGACC TGCAGCGCTA TCACCTTGGC CGTAACGGCC TTCTTGAGGC CAGTGCCTAG
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Protein sequence | MDLLFLGTSA GVPTKARNVS ATAVIEASGS HWYLVDCGEG TQHRLLHTPL SIRDLRAIFI THVHGDHCFG LPGLLASAGM SGRTQPLEVI LPAVLHDWVR QGLVASDTFL PFELRLLPVE ALIAWRSETL QVTTVQLSHR VPSVGFVFTE INPEPRLDIQ RLDAEGIPRG PLWGELAKGL TVTFNGQLLN GNDYLRPSRP PQRVIVCGDN DKPALLAAVA RGADVLVHEA TFTQAVVERT GGTFGHSTAA EVARFAEAAG VRNLVLTHFS ARYQNDPRRS PHIDTVRDEA LAHYSGQLTL AQDLQRYHLG RNGLLEASA
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