Gene Pput_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1799 
Symbol 
ID5192829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2064792 
End bp2065412 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content60% 
IMG OID640586267 
ProductTetR family transcriptional regulator 
Protein accessionYP_001267136 
Protein GI148547034 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.539023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.822653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAATC ACAAGATCGA AATCCGCCGA CGCAATATCG AAAAAATCCT GCAAGCGGCG 
GAAAAGGTGT TTGCCGAGAA GGGCTATGGC GCCACCTCCA TGGGTGATAT CGCCGAGCAG
GCTGAGCTGC CACGCTCCAA CCTGCATTAT TACTTCAGCA CCAAGGACGA GCTGTTCCGC
GCGGTGCTGC AGGACCTGCT GGATGTGTGG AAGCAGGACG CCCTGTGCTT CGAGAACTTC
GACGACCCGC GTGTGGTGCT GACCAGCTAC ATCCGGGCAA AGATGGGCCA TTCGCGCTCG
CGGCCGCTGG GCTCGAAAAT CTGGGCCGAA GAGATGCTGC ACGGGGCGCC GGTGCTGGGG
GTGAACCTCG ACGAAAGCCT GGTGCCCTGG GCGAAGATGA AAGAAGCCAA GATCCGCTGC
TGGGTGGAAG AGGGGCGTAT TCTGCCGGTA GAGCCTTCGG CGTTGCTGTA CATGATCTGG
GCGTCTACCC AGCACTATGC TGACTTTGGT TACCAGGTGC AGTTGCTCAA CGGCGGCGAG
GTGCTGTCTG ACATGGCCTT CGAGAATGCG GTGCAGACGG TGACCAGCGT GATCTTGCGG
GGAATAGGGC TGGAGCCGTG A
 
Protein sequence
MANHKIEIRR RNIEKILQAA EKVFAEKGYG ATSMGDIAEQ AELPRSNLHY YFSTKDELFR 
AVLQDLLDVW KQDALCFENF DDPRVVLTSY IRAKMGHSRS RPLGSKIWAE EMLHGAPVLG
VNLDESLVPW AKMKEAKIRC WVEEGRILPV EPSALLYMIW ASTQHYADFG YQVQLLNGGE
VLSDMAFENA VQTVTSVILR GIGLEP