| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1787 |
|---|
| Symbol | |
|---|
| ID | 5191089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2047315 |
|---|
| End bp | 2048109 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586255 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001267124 |
|---|
| Protein GI | 148547022 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.717183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.757673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCG AAGCCGGCAG TAATGGTTTC GCCAGCGTCA GCCAGGCCCC AGCCGTGAAA
CGCCTGCGGG TACTGACGGT GAACACCCAC AAGGGCTTCA CCGCCTTCAA CCGGCGCTTT
ATCTTGCCAG AGCTGCGCGA GGCCGTGCGC AGCACCCAGG CCGACATTGT CTTCCTTCAG
GAAGTGCTCG GCAGCCACGA CCGCCACGCC GCGCGCTACC CCGGCTGGCC ACAGACCTCG
CAGTACGAAT TCCTCGCCGA CAGCATGTGG AGCGACTTTG CCTACGGCCG CAATGCGGTC
TACCCTGACG GCCACCACGG CAATGCGCTG CTGTCCAAAT ACCCGATCAT CGAGCACCGC
AACCTGGACG TGTCGATCAC CGGCCCCGAA CGCCGCGGCC TGTTGCACTG TGTGCTGGAG
GTACCGGGGC AAGGCCAGGT GCATGCGGTC TGCGTGCACC TGTCGCTGCT GGAAAGCCAC
CGGCAAAAGC AGCTGCAGTT GCTGCGTAAA CTGCTGGACG CCCTGCCGGC CAACGCCCCG
GTGATCATCG CCGGCGACTT CAACGACTGG AAAAGCCACG GCAACCGCAC CCTTGGCCTG
CAACGTGACT TGCACGAAGC CTTCGAACGC CACCACGGCC ACCTCGCCCG CACCTATCCT
GCCCGCCTGC CACTGCTGCG ACTGGACCGT ATTTACCTGC GTAATGCCGA AAGCCATGGG
CCGCGGATTC TGGGGCACAA ACCTTGGTCG CACCTGTCAG ATCACCTGCC GCTGGCAGTT
GAAGTGCGGC TTTAG
|
|---|
| Protein sequence | MSLEAGSNGF ASVSQAPAVK RLRVLTVNTH KGFTAFNRRF ILPELREAVR STQADIVFLQ
EVLGSHDRHA ARYPGWPQTS QYEFLADSMW SDFAYGRNAV YPDGHHGNAL LSKYPIIEHR
NLDVSITGPE RRGLLHCVLE VPGQGQVHAV CVHLSLLESH RQKQLQLLRK LLDALPANAP
VIIAGDFNDW KSHGNRTLGL QRDLHEAFER HHGHLARTYP ARLPLLRLDR IYLRNAESHG
PRILGHKPWS HLSDHLPLAV EVRL
|
|---|
| |