Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1771 |
Symbol | |
ID | 5194169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2024669 |
End bp | 2024968 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586241 |
Product | hypothetical protein |
Protein accession | YP_001267110 |
Protein GI | 148547008 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000372178 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000314834 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAACCAT CGAAAAACGA CGAAACAGAT CTCGACAGCG AAGCCGCACG CCGCGCGCTC GACTATTACC TCAACCCCAA CCCACCGCGG CCCACCCTGG ACAACAGAAT CTGGACCCTG CACGAAGGCG TAACCGGCGA CCAGGCCCAG GAACACGCCA TCGCCCTGCT GCGCTGCGCT GCGGCCACCG CCCAGGAAAC CGCCACTCAC CAGCACGGCA GCCAGCGAGA ACTGACGTTC GCGTTGATGC ACATGATGGA CATGGCTCGC GCACTGCTGG AGCACAAACG CACCGAGTGA
|
Protein sequence | MKPSKNDETD LDSEAARRAL DYYLNPNPPR PTLDNRIWTL HEGVTGDQAQ EHAIALLRCA AATAQETATH QHGSQRELTF ALMHMMDMAR ALLEHKRTE
|
| |