| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1765 |
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| Symbol | |
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| ID | 5192116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2018996 |
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| End bp | 2019634 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640586235 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001267105 |
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| Protein GI | 148547003 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.456405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00257365 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGATTAGGG TCTTAGTGGT CGATGATCAC GATCTGGTAC GAACCGGTAT TACACGCATG
TTGGCCGACA TCGACGGCCT GCAGGTGGTG GGTGAGGGAG ATTCCGGCGA GTCGGCGCTG
AAACTGGCCC GGGAGCTGAA ACCGGACGTT GTGCTGATGG ATGTGAAAAT GCCCGGCATC
GGCGGCCTGG AGGCCACCCG CAAGCTGCTG CGCAGCCACC CTGACATCAA GGTAGTGGCG
GTGACGGTGT GCGAGGAAGA CCCGTTCCCC ACACGCTTGT TGCAGGCCGG CGCTGCCGGC
TACCTGACCA AGGGTGCAGG CCTTGACGAA ATGGTCCAGG CCATTCGTCT GGCCTTTGCC
GGCCAGCGCT ATATCAGCCC GCAGATCGCC CAGCAGTTGG CGCTGAAACC GTTCCAGCCG
CAGGGCTCGC CGTTCGACGC GCTGTCCGAG CGGGAAATCC AGATTGCCCT GATGATTGTC
GGCTGCCAGA AAGTGCAGAT CATCTCCGAC AAGTTGTGCC TCTCGCCCAA GACCGTCAAT
ACTTACCGTT ATCGGATCTT TGAAAAACTC TCGGTCACCA GCGACGTCGA ATTGACCTTG
CTGGCCGTTC GCCACGGTAT GGTTGACGCA AGCCTGTAA
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| Protein sequence | MIRVLVVDDH DLVRTGITRM LADIDGLQVV GEGDSGESAL KLARELKPDV VLMDVKMPGI
GGLEATRKLL RSHPDIKVVA VTVCEEDPFP TRLLQAGAAG YLTKGAGLDE MVQAIRLAFA
GQRYISPQIA QQLALKPFQP QGSPFDALSE REIQIALMIV GCQKVQIISD KLCLSPKTVN
TYRYRIFEKL SVTSDVELTL LAVRHGMVDA SL
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