| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1714 |
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| Symbol | |
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| ID | 5192107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1961539 |
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| End bp | 1963728 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586184 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001267054 |
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| Protein GI | 148546952 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.666149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCC GTATTCCCTC ACGCCCCGCC TTACTGGCGA TCTGCTGTTC CGTAACTCTA
ATGGCGCAGG CTGCCGAGCC GATCCAGCTG GAGGCGACCG ATGTCAGCGC CGATGCCTTG
AAAGCGCGGC CCGACGCGTT ACCGGACGAG TTTGCCGGAG GCCAGGTTGC CCGTGGCGGG
CGAATGGGCG TGCTGGGTAA CCAGGACTAC ATGGATGTGC CGTTTACCAT GACCAGTTAT
ACCGCCAAGG TGATCGAGGA CCAGCAGGCG GAGGATATCG GTGACGTCTT GGCCAACGAT
CCTTCGGTGC GTGAATCATT CGGCTTCGGC AACCAGTCCA AGGTGTTCGT GATCCGTGGT
TTGCCGTTGG CTGGCGACGA TATTTCATTC AATGGCCTGT ACGGCATCTT GCCGCGACAG
ATCATGTCCA CCGACGGCGT CGAGCGGGTC GAAGTGTTCA AGGGGCCCAA TGCCTTCCTC
AATGGCGTAA GCCCGACTGG CACCGGCCTG GGCGGCAACG TCAACCTGCA GCCCAAGCGC
GCCGGCGATG AGCCGACCCG CCGCTATACC CAGGACATCA GCGCTGATGG CCGCATTGGC
GAGCACCTGG ATATCGGCCA GCGCTTCGGT GAGGACAACC GCTTCGGCGC TCGCCTGAAC
CTCAGCCAGC GTGAAGGTGA AACCGCCGTC GACGACCAGG ACCAGCGCAC CAAGCTGTTC
ACCGCTGGCC TGGACTACCG CGGCGACAAC TTCCGCGTGT CGGCTGATAT CGGCTACCAG
AAACAGCGCA TCAACCACCT GCGCAATTCG GTGCGCCTGG GCAGCACCGC GACCAAGGCG
CCGACCGCAC CGGATGCCAG TCACAACTAT GGCCAGAACT GGAGTTACAG TGAGTCGGAA
GATACCTTCG GCATGGTGCG TGGCGACTGG GACCTGAGCG ACAACTGGAC CGCCTACCTC
GCCGGCGGCG CCCGTCACAC GCGCGAGCAG GGTACCTACG GCACGCCGGT ACTGGTCGGC
AACAGCGGCG CAGCGACGAT GACCGCTTCG GACATCGTGC ACGGCGAAGA CAACACCAGC
TTCAGTACCG GCCTGAATGG GCGGCTGCAG ACCGGGCCGA TCAGCCACCA GATCGCCGTG
GGAGCCAATA CCATGTGGAC CCAGGCGGAA AACGCCTACA TCTTCTATTC GCCAATCAAC
ACCAACATTT ACGACACCGT GCAGCAGGCC AAGCCGGGCA CGGTCACCAG CACGGGTGGC
GACATGGGTG ACCCTGGTGT CACCGGCAAG ACTCGCGCGC GGAGCATCGC GATTTCCGAC
ACCATTGGCG TCTTCGATGA CCGCCTGTTG CTGACTTACG GCTTGCGACG GCAGCAACTG
CGGGTGGAAA GCTACACCTA CGATGGCACT GTTTCCCAAG GGCAGCCCAA CCTGGCGAAT
GACGGCAGCC GCAAAGGCGA CCCGTACGAG GAGTCGATCA CCACACCGGT CTATGGCATC
GTTTTCAAGG CCACCGACAG CATTTCCTTG TATGCCAACC GCATCGAAGG CCTGGCGCAG
GGGCCGACGG CGCCAGCCAA TGTGTCGAAC GCCAGCGAGA TGTTCCCGCC AGGCCGCACC
AAGCAGCTTG AGGCTGGTAT CAAGTTCGAC CGACAGACCT TTGGTGCGAA CCTGGCCGTG
TTCCGTATCG AGAAGCCTTC GGACGGCTAC ACCTTGAACA ACGTCTTCGT TCGCGACGGC
GAGCAGGTCA ACAAAGGCCT AGAGTTGAGT GTGTTCGGCG AGCCGGTCCA GGGCTTACGC
CTGATGGCCG GCGGCACGCG CATGACCTCG GAGCAGAAAA ACACCGCCAA CGGCAGCAAC
GATGGCAACC ATGCCATCGG CGTGCCGACA TTCCAGCTCA ATGCCAGCGT CGACTGGGAC
GTGCCCGGCG TGCCGGGGCT GGCGCTGAAT GCGAGGATGC TGCGCACCGG TGGCCAGTTC
GTCGATGCGG CGAACAATGT CAGTCTGCCG ACCTGGAACC GTTTCGATGC TGGTGCCCGC
TACAAGTTGA AGGTAGCGGA GAAAGACCTG ACCTTGCGGG TGAATGTGGA GAACTTGACC
GACAAGAACT ACTGGGCCTC GGCTAACGGC GGTTACCTGA CCCAGGGTGA CCCGCGGCTG
GTGAAGTTCT CCGGGACCAT CGATTTCTGA
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| Protein sequence | MPSRIPSRPA LLAICCSVTL MAQAAEPIQL EATDVSADAL KARPDALPDE FAGGQVARGG
RMGVLGNQDY MDVPFTMTSY TAKVIEDQQA EDIGDVLAND PSVRESFGFG NQSKVFVIRG
LPLAGDDISF NGLYGILPRQ IMSTDGVERV EVFKGPNAFL NGVSPTGTGL GGNVNLQPKR
AGDEPTRRYT QDISADGRIG EHLDIGQRFG EDNRFGARLN LSQREGETAV DDQDQRTKLF
TAGLDYRGDN FRVSADIGYQ KQRINHLRNS VRLGSTATKA PTAPDASHNY GQNWSYSESE
DTFGMVRGDW DLSDNWTAYL AGGARHTREQ GTYGTPVLVG NSGAATMTAS DIVHGEDNTS
FSTGLNGRLQ TGPISHQIAV GANTMWTQAE NAYIFYSPIN TNIYDTVQQA KPGTVTSTGG
DMGDPGVTGK TRARSIAISD TIGVFDDRLL LTYGLRRQQL RVESYTYDGT VSQGQPNLAN
DGSRKGDPYE ESITTPVYGI VFKATDSISL YANRIEGLAQ GPTAPANVSN ASEMFPPGRT
KQLEAGIKFD RQTFGANLAV FRIEKPSDGY TLNNVFVRDG EQVNKGLELS VFGEPVQGLR
LMAGGTRMTS EQKNTANGSN DGNHAIGVPT FQLNASVDWD VPGVPGLALN ARMLRTGGQF
VDAANNVSLP TWNRFDAGAR YKLKVAEKDL TLRVNVENLT DKNYWASANG GYLTQGDPRL
VKFSGTIDF
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