Gene Pput_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1710 
Symbol 
ID5193289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1954047 
End bp1956701 
Gene Length2655 bp 
Protein Length884 aa 
Translation table11 
GC content68% 
IMG OID640586180 
Productosmosensitive K+ channel signal transduction histidine kinase 
Protein accessionYP_001267050 
Protein GI148546948 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACT CCGCCCGCGC CGATGCGCTG TTGGCCAACC TCCCACGCAC CGGCCGGGGC 
CGGCTGAAGG TGTTCCTTGG CGCTGCCCCC GGCGTCGGCA AGACCTTCGC CATGCTCCAG
GCTGCACACG CCCAGCAACG CCAGGGCGTG CAGGTGTTGG CCGGGGTGGT CGAAACCCAT
GGCCGCGCCG AAACCGAAGC GTTGCTCGGA GGGCTGCATC AGCAGCCCTT GCTGCGTAGC
CAGTACCGTG GCGTCACCCT CGAGGAAATG GACCTTGACG GCCTGCTGCG TGCCGCGCCG
GCCTTGGCCC TGGTGGACGA ACTGGCCCAC ACGAACGCCC CCGGCAGCCG CCACGCCAAA
CGCTGGCAGG ACGTGCAAGA ACTCTTGGCC GCAGGCATCG ACGTGTACAC CACGGTCAAC
GTTCAGCACC TGGAAAGCCT CAACGACAAG GTCCGTGACA TTACCGGCGT GCAAGTGCGC
GAGACCCTGC CGGACTGGGT GCTGCAGGAA GCGTTCGAGC TGGTGCTGAT CGACCTGCCT
CCGCGAGAGC TGCTCGAACG CCTGCGTGAA GGCAAGGTGT ACGTGCCCGA GCAGGCTAGG
GCGGCCATCG ATGCGTACTT TTCGCAAACC AACCTCACCG CCCTGCGCGA GCTGGCCATG
CAGACCGCCG CTGCTCAGGT CGATGCCGAC CTGGCCCACG GCTATCGTCA GCGCGGCCAG
GAGGCGCCGG CCTTGCGCGG CCGGTTGCTG GTGGGCATAG ACGGTGATGA CCAGGCCGAA
CGCCTGGTGC GCCATGCCAG CCGCGTGGCC CAGCGCCGCC ACCTGCCGTG GAGCCTGGTG
CATGTGGACA ACGGCCGCCT GCGTGACGAA ACCGCACGGC ATCGTTTGCA AGCCGCGCAG
CAACTGGCCG AGCGACTGGG CGGGGAGGTG GTGCTGCTGC GTGCTGGCGA AGTGGCCCGT
ACGCTGATCC AGCATGCTGT CGAACGGCGG GCCAGCCTGG TGCTGGTCGG GCAGTCCCGC
AACCGCCTGC GTCGGCGTTT GTTCGGCGCG GGTGTGGCGG CGCGGCTGCT GCGCGAAAGC
CGTGGCCTGG AAATCAACGT GCTGGACCGC GACGTGCAGC CGCCAGCGCC GCGTTCAGCC
GTGCGGCGGG TGTGGGTGTG GCGTCATTAC CTGCTGGCGC TGCTGGCCAC CGTGATGGCT
GCGGGTCTGG CCTGGGCGGT GGCCAGTGTG CTGGCGCTGC CCAATATCTC GCTGGTGTTC
CTGGCGGCGG TGTTGCTGGT CGCAGTGCGC AGTAGCCTGG GACCTGCGCT GGCTTGCGCC
GCGCTGTCGT TCCTGGCCTA TGACTTCCTG TTCATACCGC CCAACTTCTC GTTCACCATC
CAGCGCGAAG AAGACGTGCT GACACTGGTG TTCTTTCTGT TGATGGCTGC GCTCACCGGC
AACCTGGCCG CGCGCCAGCG TCGCCAGTTG CAGGCGCTGC GCGAGACCCA GGCGCAGACC
AGCCAGTTGC TCGACCTGTC TCGCCGGTTG ACGGTAGCCA CCGACCGCCA AGCCATATTC
AAGGCTGCCG GCCAGCACCT GGACGGCTGG CAGGACGCCC AGGTGTGCTT GCTGGAGCGC
AACGCCGAAG GCCAGTTGCA AGTGGCCAGC GGGGAAGCCT GCACCTTCAG CGACACCGAA
CGGGCGGCTG CCGATTGGGC CTGGCAGCAC GGGCAGGCCG CCGGCCACGG CAGCGATACC
CTGCCTAATG GCCGCTGGTG GTGGTGGCCA TTGGCGGTGG ACGATCAGCC GCTGGCGCTG
CTGGGTGTGC GCCCGCGCAA CGGGCAGCCG CTTAGCGACC CACGGCGGCG CCTGCTCACC
GCCCTAGGCC AGCCCCTGGC CCAGGCCCTG GCCCGCGCAC GCCTGGCCGA ACAGCTGGAA
GCCGCACGCC TGCACGGCGA AACCGAGCAA CTGCGCAGCG CCCTGCTGGC TTCCGTATCC
CATGACTTGC GCACGCCGTT GACCGCCATG CGTGGCAGCA TCGACAGCCT GTTGGCGTTG
GGCGATGCGA TCCCGGCTGA AGACCGCCGC GAGCTGCTGG AGGGCACCCG TAACGAAGCC
GAACGCCTCG ATCGCTACAT CCAGAACCTG CTGGACATGA CCCGCCTGGG CCATGGCGGC
CTCAAGCTGG CCCGCGACTG GGTGGCCCCG GCGGATATCG TCGGCAGTGC GCTCAACCGC
CTGCGGGTGG TGCTGGCGCC GCTGCGTGTG CACACGGACG TGCCGGCCGA GCTGCCATTG
CTGTTCGTGC ATGCGGCGTT GATCGAGCAG GCACTGGTCA ACGTGCTGGA AAACGCCGCA
CGCTTTTCGC CGGCCAATGG TCGGCTTGAG CTGCAGGTGG CGGTGCATGA CGACCAGCTG
CGCTTGACCG TCAGCGACCA GGGCCCCGGC ATTCCCGAAG CCGACCGCGA GAAAATCTTC
GACATGTTCT ACACCGCCGC CCGTGGCGAC CGCGGCGGGC AGGGTACCGG GCTGGGCCTG
GCGATCTGCC AGGGCATGAT CGGTGCCCAT GGCGGGCAGA TTCTGGTGGG CGAAGGCATT
GATGGCCAAG GCACCAGCAT CACTCTATGC TTGCCGCTGC CTCCTCAACC TGAAGCCGAA
AGCGAAACCC CATGA
 
Protein sequence
MSDSARADAL LANLPRTGRG RLKVFLGAAP GVGKTFAMLQ AAHAQQRQGV QVLAGVVETH 
GRAETEALLG GLHQQPLLRS QYRGVTLEEM DLDGLLRAAP ALALVDELAH TNAPGSRHAK
RWQDVQELLA AGIDVYTTVN VQHLESLNDK VRDITGVQVR ETLPDWVLQE AFELVLIDLP
PRELLERLRE GKVYVPEQAR AAIDAYFSQT NLTALRELAM QTAAAQVDAD LAHGYRQRGQ
EAPALRGRLL VGIDGDDQAE RLVRHASRVA QRRHLPWSLV HVDNGRLRDE TARHRLQAAQ
QLAERLGGEV VLLRAGEVAR TLIQHAVERR ASLVLVGQSR NRLRRRLFGA GVAARLLRES
RGLEINVLDR DVQPPAPRSA VRRVWVWRHY LLALLATVMA AGLAWAVASV LALPNISLVF
LAAVLLVAVR SSLGPALACA ALSFLAYDFL FIPPNFSFTI QREEDVLTLV FFLLMAALTG
NLAARQRRQL QALRETQAQT SQLLDLSRRL TVATDRQAIF KAAGQHLDGW QDAQVCLLER
NAEGQLQVAS GEACTFSDTE RAAADWAWQH GQAAGHGSDT LPNGRWWWWP LAVDDQPLAL
LGVRPRNGQP LSDPRRRLLT ALGQPLAQAL ARARLAEQLE AARLHGETEQ LRSALLASVS
HDLRTPLTAM RGSIDSLLAL GDAIPAEDRR ELLEGTRNEA ERLDRYIQNL LDMTRLGHGG
LKLARDWVAP ADIVGSALNR LRVVLAPLRV HTDVPAELPL LFVHAALIEQ ALVNVLENAA
RFSPANGRLE LQVAVHDDQL RLTVSDQGPG IPEADREKIF DMFYTAARGD RGGQGTGLGL
AICQGMIGAH GGQILVGEGI DGQGTSITLC LPLPPQPEAE SETP