| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1693 |
|---|
| Symbol | |
|---|
| ID | 5194548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1935971 |
|---|
| End bp | 1937191 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586163 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
|---|
| Protein accession | YP_001267033 |
|---|
| Protein GI | 148546931 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.374735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG TCGTTATCAC TGGTCTGGGC ATCGTATCGT GCCTGGGCAA TGACAAAGCT
ACCGTCACCG AAAACCTGCG CAACAGCCGT CCGGGTATCC GTTTCAACCC GGAATACAAG
GAAATGGGGC TGCGTAGCCA GGTTTCCGGG TCCATCGACC TCAACCTCGA AGAACTGATC
GACCGCAAGG TTTACCGCTT CGTCGGCCAT GCGGCTGCCT ACGCCTACCT GGCCATGCAG
GACGCGATCA AGGACGCCGG CCTGACCGAA GAGCAGGTTT CCAGCCCGCG TACCGGCCTG
GTGGCCGGTT CCGGTGGCGC CTCGACCCTG AACCAGATGG AAGCGCTGGA CACCCTGCGT
GAGAAAGGCG TCAAGCGCGT CGGCCCATAC CGCGTTACCC GCACCATGGG CAGCACCGTG
TCGGCATGCC TGGCCACCCC CTTCAAGATC AAGGGCATCA ACTACTCGAT CTCGTCGGCC
TGTGCCACCT CGGCTCACTG CATCGGTACC GCACTGGAGC AGATCCAGTG GGGCAAGCAG
GACATCGTCT TCGCCGGTGG TGGTGAAGAA GAGCACTGGA GCCAGTCGTT CCTGTTCGAT
GCCATGGGCG CCCTGTCGAC CAAGCGCAAC GAAACCCCGG AACTGGCCTC GCGCGCCTAC
GATGCTGACC GTGATGGTTT CGTCATCGCT GGCGGTGGCG GCATGGTCGT GGTCGAGGAA
CTGGAACACG CCCTGGCCCG CGGCGCCAAG ATCTACGCCG AAATCGTTGG CTACGGTGCG
ACTTCCGACG GCTACGACAT GGTTGCACCG AGCGGCGAAG GCGCCATCCG CTGCATGCAG
CAGGCGCTGT CCACTGTCGA CACCCCGATC GACTACCTGA ACACCCACGG TACCTCGACC
CCGGTCGGTG ACGTGGCCGA GATCAAGGGC GTGCGTGCCG TGTTCGGCGA CAAGGCGCCG
AAGATCAGCT CTACCAAGAG CCTGTCGGGT CACTCGCTGG GCGCTGCCGG CGTGCACGAG
GCGATCTACT GCCTGCTGAT GATGGAAAAC AACTTCATCG CCGGCTCTGC CAACATCGAC
GAGCTGGATC CGGAAGTCGC CGACTTGCCA ATCCTGCGTA AAACCGAAGA AAACGCCAAG
ATCGACACGG TCATGAGCAA CAGCTTCGGC TTCGGCGGCA CCAACGCCAC CCTGGTGCTC
AAGCGCTGGG AAGGCAAGTA A
|
|---|
| Protein sequence | MRRVVITGLG IVSCLGNDKA TVTENLRNSR PGIRFNPEYK EMGLRSQVSG SIDLNLEELI
DRKVYRFVGH AAAYAYLAMQ DAIKDAGLTE EQVSSPRTGL VAGSGGASTL NQMEALDTLR
EKGVKRVGPY RVTRTMGSTV SACLATPFKI KGINYSISSA CATSAHCIGT ALEQIQWGKQ
DIVFAGGGEE EHWSQSFLFD AMGALSTKRN ETPELASRAY DADRDGFVIA GGGGMVVVEE
LEHALARGAK IYAEIVGYGA TSDGYDMVAP SGEGAIRCMQ QALSTVDTPI DYLNTHGTST
PVGDVAEIKG VRAVFGDKAP KISSTKSLSG HSLGAAGVHE AIYCLLMMEN NFIAGSANID
ELDPEVADLP ILRKTEENAK IDTVMSNSFG FGGTNATLVL KRWEGK
|
|---|
| |