Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1691 |
Symbol | |
ID | 5194604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1933825 |
End bp | 1934688 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586161 |
Product | pirin domain-containing protein |
Protein accession | YP_001267031 |
Protein GI | 148546929 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0748863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCC CACTGGTCAT CCACCCCCGA GCCGAGACGG TCGAGGGCCA GCCGATCCTG CGTCCGCTGC CATCAGCCCA GTGCCGCAGC GTCGGCCCGT TCGTGTTCTT CGACCACATG CTCGAAACAG ACTATGCCCC GGGGCATGGC ATGGACATCC GCCAGCACCC GCATATCGGC CTGTCCACCC TGACCTACCT GTTCGAAGGC GCAATCCTGC ACAAGGACAG CCTCGGCTCG GCGCAGCGGG TGCTGCCTGG TGATGTCAGC TGGATGACTG CGGGCAGCGG CGTCGCCCAT GTCGAGCGCA CCCCGGAAGA TGCCCTGGCC CATGGTTCGC GCCTGCATGG GCTGCAGGTA TGGCTGGCGT CGCCACGCGC GTTTGAGCAA GGCCCGGCAA GTTACAGCCA TCACCCCGCC GAGAGCCTGC CCGTCAGTGA CAGCCTGGGT GTACGTATCT GCATGATTGC GGGCAGCGGG TTCTGCCTGG CGTCACCGGT GCCGGTGCTG TCCCCTACCC TTTATGCGCA TGTCCGGATG CAACCGGCGA CCACCTTGCT GGTACCGACC GAGCATGTGC AGCGGGCGCT GTACGTGCTC GATGGTGAGT TGATGATGAA CGATGAAGAC GTGGAGCCGT GCACCCTGGT GGTGTTGCCG CAGGGCGAAG AGGTGACATT GTATGCCGAG GGTGAATGCC AACTGGTACT GATTGGCGGC GCACCGCTGG ATGGGCCGCG TCGGATGAAC TGGAACTTCG TCGCCAGCGA CCCGGAGCTG ATCGAGCGGG CCCGGGCCAG GTGGGCTGCG GGGGATTGGC CGGAGGTGCC GGGGGAACAT TCGAGGATCG AGTTGCCTCG GTGA
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Protein sequence | MSSPLVIHPR AETVEGQPIL RPLPSAQCRS VGPFVFFDHM LETDYAPGHG MDIRQHPHIG LSTLTYLFEG AILHKDSLGS AQRVLPGDVS WMTAGSGVAH VERTPEDALA HGSRLHGLQV WLASPRAFEQ GPASYSHHPA ESLPVSDSLG VRICMIAGSG FCLASPVPVL SPTLYAHVRM QPATTLLVPT EHVQRALYVL DGELMMNDED VEPCTLVVLP QGEEVTLYAE GECQLVLIGG APLDGPRRMN WNFVASDPEL IERARARWAA GDWPEVPGEH SRIELPR
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