Gene Pput_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1690 
Symbol 
ID5194038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1932810 
End bp1933535 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content61% 
IMG OID640586160 
Productdienelactone hydrolase 
Protein accessionYP_001267030 
Protein GI148546928 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0305937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG TAATCGTCGA ATCGCTGGTT TATCACCTGT CTGGCAAGGC CTTCGAAAGC 
CGTTTGGTCT ATGAGCCGGG TGCGCTGGGC CGCCCAGGGC TGGTGATGGC GCCGAACTGG
ATGGGCATTG GTGAAGGTGC CGAGCGCATT GCCAAGGAAG TGGCCGAGAA GGGCTATGTG
GTGCTGATCG CCGACCTGTA CGGGCAATCG GTGCGCCCGT CCAATGCCGA TGAGGCAGGC
GTGGCGATGA TGCCGCTGAA GAATGACCGT GACGAACTGC GCAAGCGCAT GCAGGAAGCC
CTGGCGCAAT TGCTGGGGCA GTCGAAGGCG CTGCTGGAGC CTGGCAAGGT GGCCACCTTC
GGCTTCTGCT TCGGTGGCTG CTGTGCGTTG GAACTGGCCC GTAGCGGCGC CGACCTGCGT
GCGGCTGTGT CGTTCCACGG CACCCTGGAC ACGCCGAATC CTGAAGATGC CAAGCGCATC
AAGGGCTCGG TGCTGGTGTT GCATGGTGCC TCCGACCCAT TGGTGCCTAA GGAGCAGTTG
CCGGCATTCG AGGACGAGAT GAACGCGGCC AAGGTGGACT GGCAGTTGCT CAGTTATGGC
GGCGCGGTGC ACTCGTTTAC CGACCCGAAT GCCAATGTGC CGGGCAAGAT GCAGTATAAC
CGGCGCACTT CCGAGCGAGC GTTTCGTTCG ATGCATAATC TGCTGAGTGA AGTGTTCCAG
CGTTGA
 
Protein sequence
MSKVIVESLV YHLSGKAFES RLVYEPGALG RPGLVMAPNW MGIGEGAERI AKEVAEKGYV 
VLIADLYGQS VRPSNADEAG VAMMPLKNDR DELRKRMQEA LAQLLGQSKA LLEPGKVATF
GFCFGGCCAL ELARSGADLR AAVSFHGTLD TPNPEDAKRI KGSVLVLHGA SDPLVPKEQL
PAFEDEMNAA KVDWQLLSYG GAVHSFTDPN ANVPGKMQYN RRTSERAFRS MHNLLSEVFQ
R