Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1673 |
Symbol | |
ID | 5190489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1879636 |
End bp | 1880832 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586143 |
Product | peptidase |
Protein accession | YP_001267013 |
Protein GI | 148546911 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAA AGTCACGCTC GAAACTCTGG TTCCTGGTTC ACAGCTGGCT GGCCCTGCCC ATCTGGTTCT TCGTGCTGAT CGTCTGCTTC ACCGGCACCC TGGCAGTGGT CAGCCAGGAA CTGGTGTGGC TGGCCAAACC GGAGATACGC GCGGCGAAGC CGAGCGATGA TGCGCCACTG CTGACTTACG ACCAGGTGCT CAAGGCCCTG CGTGAAGCCC GCCCCGATCT GGATGTGCAA TACATCATGC GCCCGGACGA GTCGCACTTC GCGCTGCAGG TGCAGGTGGT GCAACCGGAC AACACCACCC AGAACCTCTA CGTGAACCCC TATACAGGCA AGATCCAGGG CATCAGCCCT TCCTTCGACT TCCGCCAGTT CACTCGCGCC TTGCATGGCT GGTGGCTGGT ACCTTTCGGC AACGGCTACC CGTGGGGGTG GTACCTGGTC TCGCTGCTGG GCTTGCCGAT GCTTGCCTCG CTGGTCACCG GCCTGGTCGT CTACAAGCGC TTCTGGAAAG GCTTTCTGAA ACCTACCCTG CGCTTTCGCC AAGGTGCGCG CATCTTCTGG GGTGACTTCC ATCGCCTGAG CGGTATCTGG TCGATCTGGT TCATTGCCGT GATCGCGATC ACCGGCACCT GGTTCCTGAT CCAGGCGTTG CTGGCCGACA ACCACATCTC GATCTCAAGC CGCGACGTCC CCGCCGTGGT GGCCCGCGAA GACGTACCGC TGCTGCAGGC TGGCGAAGCG CCCCGGCTGG TCAGCCTGGA GCATGCCATC GAAACGGTGA AGGCGCAGAT CCCCGGCTTC GAGGCATCCT TCGTGCGCCT GCCCGGCAAT GCCTATGACA CCTTCAACAT CCGTGGCCGC GGCTGGTACC CGCTGATGTT CCAGAGCGCC AGCATCAACC CGTACACAGG CGTGGTCGCC ACCTCGCACA CCCTGGATGA TCGCACGTCG CTGGAGTTCG TCACCGAATC CATGCGCCCG TTGCACACAG GCGACTTCGG CGGGCTGTGG GTCAAGATGA TCTGGTTCGT TTTTGGCCTG GTGCTGACCT TGATGGTGCT CAGCGGCCTG TTGATCTGGA GCAAGCGCAC CGCACAGGCC ACTGCAGCCG CACTGAAACG CAAGCCGCGC AGCGCACCAA CGGCCAACGC CGCGCAAGAC GCCCAACTGC CGGAGACCGC CCGATGA
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Protein sequence | MSKKSRSKLW FLVHSWLALP IWFFVLIVCF TGTLAVVSQE LVWLAKPEIR AAKPSDDAPL LTYDQVLKAL REARPDLDVQ YIMRPDESHF ALQVQVVQPD NTTQNLYVNP YTGKIQGISP SFDFRQFTRA LHGWWLVPFG NGYPWGWYLV SLLGLPMLAS LVTGLVVYKR FWKGFLKPTL RFRQGARIFW GDFHRLSGIW SIWFIAVIAI TGTWFLIQAL LADNHISISS RDVPAVVARE DVPLLQAGEA PRLVSLEHAI ETVKAQIPGF EASFVRLPGN AYDTFNIRGR GWYPLMFQSA SINPYTGVVA TSHTLDDRTS LEFVTESMRP LHTGDFGGLW VKMIWFVFGL VLTLMVLSGL LIWSKRTAQA TAAALKRKPR SAPTANAAQD AQLPETAR
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