Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1669 |
Symbol | |
ID | 5194636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1875483 |
End bp | 1876367 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640586139 |
Product | succinyl-CoA synthetase subunit alpha |
Protein accession | YP_001267009 |
Protein GI | 148546907 |
COG category | [C] Energy production and conversion |
COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.212959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTCC TGATCAATAA AGATACCAAA GTCATCTGCC AGGGCTTCAC CGGCTCGCAG GGTACTTTCC ACTCCGAACA GGCCATTGCC TACGGCACCA AGATGGTCGG CGGCGTAACC CCAGGCAAGG GTGGCACCAC CCACCTGGGC CTGCCGGTGT TCAACACCGT CAAGGAAGCC GTGGAAGCTA CCGGCGCTGA CGCTTCGGTC ATCTACGTAC CGGCTCCGTT CTGCAAAGAC TCGATCCTGG AAGCTGCCTT TGGCGGCATC AAGCTGATCG TCTGCATCAC CGAAGGCATT CCTACCCTGG ACATGCTGGA TGCCAAGGTC AAGTGCGACG AGCTGGGCGT GACCCTGATC GGCCCTAACT GCCCAGGTGT CATCACCCCG GGCGAGTGCA AGATCGGCAT CATGCCAGGC CACATCCACT TGCCAGGCAA GGTCGGTATC GTTTCGCGTT CCGGCACCCT GACCTACGAA GCTGTGAAGC AGACCACCGA CGCCGGCTTC GGCCAGTCGA CCTGCGTCGG CATCGGCGGT GACCCGATCC CGGGCTCCAA CTTCATCGAC ATCCTGAAGC TGTTCCAGGA AGACCCGAAG ACCGAAGCGA TCGTGATGAT CGGTGAGATC GGCGGTTCGG CTGAAGAAGA AGCCGCGGCC TACATCAAGG CCCACGTCAC CAAGCCTGTC GTTTCCTACA TCGCCGGTGT TACCGCACCG GCGGGCAAGC GCATGGGCCA CGCTGGCGCC ATCATCTCCG GTGGCAAGGG TACTGCGGAC GAGAAGTTCG CCGCCCTGCA GGACGCGGGT GTGAAAACCG TGCGTTCGCT GGCTGACATC GGCAAGGCCC TGGCCGAGCT GACTGGCTGG GAAGCCAAGA AGTAA
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Protein sequence | MSVLINKDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGTTHLG LPVFNTVKEA VEATGADASV IYVPAPFCKD SILEAAFGGI KLIVCITEGI PTLDMLDAKV KCDELGVTLI GPNCPGVITP GECKIGIMPG HIHLPGKVGI VSRSGTLTYE AVKQTTDAGF GQSTCVGIGG DPIPGSNFID ILKLFQEDPK TEAIVMIGEI GGSAEEEAAA YIKAHVTKPV VSYIAGVTAP AGKRMGHAGA IISGGKGTAD EKFAALQDAG VKTVRSLADI GKALAELTGW EAKK
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