| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1587 |
|---|
| Symbol | |
|---|
| ID | 5193584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1772206 |
|---|
| End bp | 1773510 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586056 |
|---|
| Product | guanine deaminase |
|---|
| Protein accession | YP_001266927 |
|---|
| Protein GI | 148546825 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02967] guanine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTTA CCCGCAAAGC CTACCGTGCC GCCATCCTGC ACAGCATTGC CGACCCGGCC
GAGGTGGGCC TGGAGGCTTC CCATGAATAC TACGAAGACG GCCTGCTGGT GGTCGACGAT
GGCCGCATCA GCGCCGTTGG GCACGCCAGT GAACTGCTGC CGACGCTGGA TGCCGGCATC
CCGGTCGAGC ACTACCAGGA CGCGCTGATC ACCCCGGGCT TCATCGATAC CCACATCCAC
TTCCCGCAGA CCGGCATGAT CGGCTCGTAC GGCGAGCAGT TGCTGGACTG GCTGAACACC
TACACCTTCC CGTGCGAAAA GCAGTTCGCC GACAAAGGCC ACGCCGACCA GGTGGCGAAG
ATCTTCCTCA AGGAACTGCT GCGCAACGGC ACCACCACTG CGCTGGTATT CGGCAGCGTG
CACCCGGAAT CGGTCAACGC CCTGTTCGAA GAGGCCGAGC GCCTGGACCT GCGCCTGATC
GCCGGCAAAG TGATGATGGA CCGCAATGCC CCAGACTACC TGACCGACAC CGCCGAGTCC
GGCTATGCCG AAAGCAAGGC ACTGATCGAG CGCTGGCACG GCAAAGGCCG CCTGCACTAT
GCAGTGACCC CGCGTTTCGC CCCGACCAGC ACGCCGCAAC AGTTGACCCT GGCCGGCCAA
TTGCTCAAGG AGCACCCGGG CGTGTACATG CACACGCACC TGTCGGAAAA CCTCAAGGAA
ATCGACTGGG TCAAGTCGCT GTTCCCTGAG CAAAAGGGTT ATCTGGACGT CTACGATCAC
TTCGAGCTGC TGGGCGAGCG CTCGGTGTTC GCCCACGGCG TGCACCTGTG CGACGACGAG
TGCCAGCGCC TGGCAGAAAC CGGCTCGGCC GTGGCCTTCT GCCCCACCTC CAACCTGTTC
CTCGGCAGCG GCCTGTTCAA CCTGCCCCAG GCCGAGCGGT TCAAGGTCAA CGTGGGCCTG
GGTACCGACG TTGGCGCCGG CACCAGCTTC TCTCTGCTCA ACACCCTGAA CGAGGCATAC
AAGGTGATGC AGCTGCAAGG CGCGCGCCTG CACCCGTACA AATCGCTGTA CCTGGCCACC
CTCGGCGGCG CTCGCGCGCT ACGCCTGGAC GACCGTATCG GCAGCCTGCG CCCGGGTAAC
GATGCCGACT TCGTGGTGCT GGACTACAAG GCCACGCCAC TGCTGGACTA TCGCATCCAG
CAGTCCAACA GCATCGAAGA AACCTTGTTC GTGCTCACCA CCCTGGGCGA TGACCGTACC
GTGCGTGAAA CCTACGCCGC CGGGCGCTGC GTGCACCAGC GCTAA
|
|---|
| Protein sequence | MTVTRKAYRA AILHSIADPA EVGLEASHEY YEDGLLVVDD GRISAVGHAS ELLPTLDAGI
PVEHYQDALI TPGFIDTHIH FPQTGMIGSY GEQLLDWLNT YTFPCEKQFA DKGHADQVAK
IFLKELLRNG TTTALVFGSV HPESVNALFE EAERLDLRLI AGKVMMDRNA PDYLTDTAES
GYAESKALIE RWHGKGRLHY AVTPRFAPTS TPQQLTLAGQ LLKEHPGVYM HTHLSENLKE
IDWVKSLFPE QKGYLDVYDH FELLGERSVF AHGVHLCDDE CQRLAETGSA VAFCPTSNLF
LGSGLFNLPQ AERFKVNVGL GTDVGAGTSF SLLNTLNEAY KVMQLQGARL HPYKSLYLAT
LGGARALRLD DRIGSLRPGN DADFVVLDYK ATPLLDYRIQ QSNSIEETLF VLTTLGDDRT
VRETYAAGRC VHQR
|
|---|
| |