| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1513 |
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| Symbol | fliR |
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| ID | 5190783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1696903 |
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| End bp | 1697679 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640585983 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_001266854 |
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| Protein GI | 148546752 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.859445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0902161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAAC TGACCGATAC GCAGATCGGC ACCTGGGTCG CCACCTTCAT CCTGCCGTTG
TTCAGAGTAA CGGCGGTGCT GATGACCATG CCGATTTTCG GTACCCGCAT GTTGCCGGCG
CGGGTGCGCC TCTACGTGGC AGTGGCGATT ACTGTGGTGA TCGTGCCTGC ACTGCCACCG
CTGCCTGAAT TCGACCCGCT GAGCCTGCGC GGTTTGCTAC TGTGCGCCGA GCAGATCATC
GTTGGCGCGC TGTTTGGCCT GGCCTTGCAG TTGTTGTTCC AGGCTTTCGT GATTGCCGGG
CAGATTGTTG CGGTGCAGAT GGGCATGGCC TTCGCCTCGA TGGTTGACCC CGCCAACGGG
GTCAACGTCA CGGTAATCAG CCAGTTCATG ACCATGTTGG TGAGCGTGCT GTTCCTGTTG
ATGAACGGGC ACCTGGTGGT GTTCGAGGTG CTGACCGAGA GCTTTACCAC CTTGCCGGTG
GGGAGTGCGC TGGTGGTCAA TCACTTCTGG GAGCTGGCCG GACGCATGGG TTGGGTGTTC
GGTGCTGGGC TTTTGTTGAT CCTGCCGGTA ATCGCTGCGC TGCTGGTTGT GAACATCGCC
TTTGGCGTGA TGACCCGTGC GGCACCGCAG TTGAATATCT TCTCGATCGG TTTCCCGTTG
ACCCTGGTCA TGGGTATGGC CATTTTCTGG ATCGGCCTGG CCGATATCCT CTCCCACTAC
CAGGCATTGG CCAGCGAAGC GCTGCAATGG TTGCGTGAAT TGGCAAGGGC GCGCTGA
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| Protein sequence | MLELTDTQIG TWVATFILPL FRVTAVLMTM PIFGTRMLPA RVRLYVAVAI TVVIVPALPP
LPEFDPLSLR GLLLCAEQII VGALFGLALQ LLFQAFVIAG QIVAVQMGMA FASMVDPANG
VNVTVISQFM TMLVSVLFLL MNGHLVVFEV LTESFTTLPV GSALVVNHFW ELAGRMGWVF
GAGLLLILPV IAALLVVNIA FGVMTRAAPQ LNIFSIGFPL TLVMGMAIFW IGLADILSHY
QALASEALQW LRELARAR
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