Gene Pput_1509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1509 
SymbolfliN 
ID5192783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1694938 
End bp1695402 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content61% 
IMG OID640585979 
Productflagellar motor switch protein 
Protein accessionYP_001266850 
Protein GI148546748 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.785237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0757312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACG AAAACGAGAT CACCTCCCCA GAGGACCAGG CACTGGCCGA TGAGTGGGCC 
GCAGCGTTGG AAGAAACCGG TTCTGCCGGC CAGGCCGACA TCGATGCACT GCTGGGCGGG
GACACCGGCA GCAGCGGCCC GGGCCGCCTG CCGATGGAAG AATTCGCCAG CTCGCCGAAG
CCGAACGAAA ATGTCAGCCT CGAAGGCCCT AACCTGGACG TAATCCTGGA CATCCCGGTG
AACATTTCCA TGGAAGTGGG CAGCACCGAG ATCAACATTC GCAACCTGCT GCAGCTCAAC
CAGGGCTCGG TGATCGAGCT CGACCGCCTG GCTGGCGAGC CGCTTGACGT GCTGGTAAAC
GGCACCTTGA TCGCCCATGG CGAAGTAGTG GTGGTCAACG AAAAGTTCGG CATCCGCCTG
ACCGACGTGA TCAGCCCCAG CGAACGTATC AAGAAGTTGC GCTGA
 
Protein sequence
MANENEITSP EDQALADEWA AALEETGSAG QADIDALLGG DTGSSGPGRL PMEEFASSPK 
PNENVSLEGP NLDVILDIPV NISMEVGSTE INIRNLLQLN QGSVIELDRL AGEPLDVLVN
GTLIAHGEVV VVNEKFGIRL TDVISPSERI KKLR