| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1506 |
|---|
| Symbol | |
|---|
| ID | 5193827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1691930 |
|---|
| End bp | 1693195 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640585976 |
|---|
| Product | flagellar hook-length control protein |
|---|
| Protein accession | YP_001266847 |
|---|
| Protein GI | 148546745 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG3144] Flagellar hook-length control protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.374735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0562001 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTCG CACCCAACCC TTTGTTGCAA GCCAATGCCA TTGCCAAGAC CTCGCGTTCG
GCCGCCGTGC AGGCGGACAA GCCGCTGCAG GCGCTGGGCG ACAAGGGCGA TGCCTTTGGC
CAGGTGATGG CCAGGCAGGG CCGCGACAAG GTTACCGGGC AGGACGACAA GGTTGCTCAA
GCCAAGCCCA AGGACAAACC TGATGCGGCA GCCGGCGGCA AGAAAGACCC GGCTGGCAAA
GCTGCAGTTG CCGATGACGG CAACAAGTTG CCAAAAGAGG ATTCGGCCCA GGCCGATACG
GGTGTGCGTG ATGCCAGCCT GGTGGCCGGT CAGGTCACTG ATGCCCAGCC CGGCGCACAA
CTGATCCAGG CGCAGGCCGA GGCGGTGGCG CCCGTGCTGC AGGCGGCCAC GGCGCAAACC
CAGGTCGCCG CGGCACTGCC TGAAGAGCTG TCCGGCGAGG AGGCCTTCGA TCCGGATGCT
GACCCCCTGG CCAACCTGCC AACCCTGCGC TTCGCGCTGG AGCACAGTGC CCAGGCCAAG
GGTGGCACCT CGGCACATGC CCTCGATGCT GCCCAGGCTC AGGGCGAGGA AGGGCAGGCG
GCCGTCAATA CCTTGGCGAA TTTGGTCGAG AATACCGATG GCGAAAGCGC CGAATCCGGT
GACAAGGCCT TTGGCAGCTT GCTTGAGGAC GGCCTGAAAG ACACCAAGAG TGCCAGCAGC
GACACCCGCA TCGATGATTT TGCCAACCGC CTGGCCAGCC TGACCCAGGC GGCCACGGCC
AAGACCGCCA ATGCCGTGCC GGCCAATGCG AACCCGCTGC ATCAGCCATT GCCAATGAAC
CAGAACGCTT GGGCAGAAGG CCTGGTCAAC CGGGTCATGT ACCTGTCCAG CCAGAACCTC
AAGTCGGCTG ATATCCAACT GGAGCCAGCA GAACTCGGTC GCCTCGACAT TCGCGTCAAT
GTTGCGGCGG ACCAGGCGAC CCAGGTCACC TTCATCAGCG GCCACGCCGG CGTACGTGAT
GCCCTCGACA GCCAGGTGCA CCGCCTGCGC GAACTGTTTG CCCAGCAGGG GTTGGCGCAG
CCGGATGTCA ACGTGGCTGA CCAGTCGCGC GGGCAGCAAC AACAGCAGGG GCAGGCGCAG
GGCAGCAACT TTTCCGGGGT GGCGGCGCGC CGCTCCGAGC AGGGTGGGGT CGAGGCGGTC
GATAGCGCCC GGCCTTTGGA GCAGCAGGTG GTTGTCGGCG ACAGTGCGGT CGATTATTAC
GCCTGA
|
|---|
| Protein sequence | MPVAPNPLLQ ANAIAKTSRS AAVQADKPLQ ALGDKGDAFG QVMARQGRDK VTGQDDKVAQ
AKPKDKPDAA AGGKKDPAGK AAVADDGNKL PKEDSAQADT GVRDASLVAG QVTDAQPGAQ
LIQAQAEAVA PVLQAATAQT QVAAALPEEL SGEEAFDPDA DPLANLPTLR FALEHSAQAK
GGTSAHALDA AQAQGEEGQA AVNTLANLVE NTDGESAESG DKAFGSLLED GLKDTKSASS
DTRIDDFANR LASLTQAATA KTANAVPANA NPLHQPLPMN QNAWAEGLVN RVMYLSSQNL
KSADIQLEPA ELGRLDIRVN VAADQATQVT FISGHAGVRD ALDSQVHRLR ELFAQQGLAQ
PDVNVADQSR GQQQQQGQAQ GSNFSGVAAR RSEQGGVEAV DSARPLEQQV VVGDSAVDYY
A
|
|---|
| |