Gene Pput_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1473 
SymbolflgJ 
ID5191717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1649281 
End bp1650435 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content61% 
IMG OID640585943 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_001266814 
Protein GI148546712 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0415846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.419127 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA AAAGCCTGGT TTCCGGCAGT GCCGACAGCG GTGCCTACAC CGATCTCAAT 
CGCCTGAGTT CGCTCAAGCA TGGCGACCGC GACAGCGATG CCAACGTACG CAAGGTAGCC
CAGGAGTTCG AGTCGCTGTT CATCAGCGAA ATGCTCAAGG CCTCGCGCAA GGCAAGCGAC
GTACTGGCCG ACGACAACCC GATGAACACC GAAACGGTCA AACAGTACCG TGACATGTAT
GACCAGCAAC TGGCTGTGAG CATGTCACGC GAAGGTGGTG GTATCGGGCT GCAGGATGTG
CTGGTGCGCC AGCTGTCGAA GAACAAGGCC AGCCAGGCCA GCACCAGCCC GTTTCCACGT
ACCGAGGGCA ACGCCCCGGC GCTGTGGGGC AACAAGGTGG CCGAGCCCGT GCATGCCACC
CAGTCGACCG CCACCCGCAA CGACGTCGCT GCACTCAACG CGCGTCGTCT GGCGCTGCCG
AGCAAACTCA CCGATCGCCT GCTGGCCGGC ATTGTGCCAT CGTCGGCCAC CGCAAATACC
GCCACTGTGC CTGCCCGTGA CGGCCAGCAA GTGGCCAAGG CCTTCGCCGT GCCGGACAAC
GGCCTGCGCA TTGTCGGCCG CGCCGTGGCC CAGCCGCCGC TGGCACCGAA CAAGGCCTTT
GGCGACAGCG ATGAATTCGT CGCCACCATG CTGCCGATGG CCGAACAGGC GGCCAAGCGC
ATTGGTATCG ATCCACGCTA CCTGGTGGCC CAGGCTGCAC TGGAAACCGG GTGGGGCAAG
TCGGTCATGC GCAACACCGA TGGCAGCAGC AGCCACAACC TGTTCGGCAT CAAAGCCACT
GGCAACTGGG ACGGCGGTGA GGCGAGGGCG ATTACCAGCG AATACCGTGA TGGCCAGTTC
GTCAAGGAGA CGGCAGCGTT CCGTTCGTAC GATTCCTACC AGGACAGCTT CCACGACCTG
GTGAGCCTGT TGCAGAACAA TTCGCGCTAT CAAGATGCGG TGAAGGCCGC CGATAAACCA
GAGCAGTTCG TGCAAGAGTT GCAAAAGGCC GGGTACGCCA CCGACCCGAA TTACGCCAGC
AAGATCTCGC AGATCGCAAG ACAGATGAAG TCGTACGAGC ACTACGCAAT GCTCGGTACT
GCAACGAAAC TTTAA
 
Protein sequence
MNSKSLVSGS ADSGAYTDLN RLSSLKHGDR DSDANVRKVA QEFESLFISE MLKASRKASD 
VLADDNPMNT ETVKQYRDMY DQQLAVSMSR EGGGIGLQDV LVRQLSKNKA SQASTSPFPR
TEGNAPALWG NKVAEPVHAT QSTATRNDVA ALNARRLALP SKLTDRLLAG IVPSSATANT
ATVPARDGQQ VAKAFAVPDN GLRIVGRAVA QPPLAPNKAF GDSDEFVATM LPMAEQAAKR
IGIDPRYLVA QAALETGWGK SVMRNTDGSS SHNLFGIKAT GNWDGGEARA ITSEYRDGQF
VKETAAFRSY DSYQDSFHDL VSLLQNNSRY QDAVKAADKP EQFVQELQKA GYATDPNYAS
KISQIARQMK SYEHYAMLGT ATKL