Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1473 |
Symbol | flgJ |
ID | 5191717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1649281 |
End bp | 1650435 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640585943 |
Product | flagellar rod assembly protein/muramidase FlgJ |
Protein accession | YP_001266814 |
Protein GI | 148546712 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | [TIGR02541] flagellar rod assembly protein/muramidase FlgJ |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0415846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.419127 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCA AAAGCCTGGT TTCCGGCAGT GCCGACAGCG GTGCCTACAC CGATCTCAAT CGCCTGAGTT CGCTCAAGCA TGGCGACCGC GACAGCGATG CCAACGTACG CAAGGTAGCC CAGGAGTTCG AGTCGCTGTT CATCAGCGAA ATGCTCAAGG CCTCGCGCAA GGCAAGCGAC GTACTGGCCG ACGACAACCC GATGAACACC GAAACGGTCA AACAGTACCG TGACATGTAT GACCAGCAAC TGGCTGTGAG CATGTCACGC GAAGGTGGTG GTATCGGGCT GCAGGATGTG CTGGTGCGCC AGCTGTCGAA GAACAAGGCC AGCCAGGCCA GCACCAGCCC GTTTCCACGT ACCGAGGGCA ACGCCCCGGC GCTGTGGGGC AACAAGGTGG CCGAGCCCGT GCATGCCACC CAGTCGACCG CCACCCGCAA CGACGTCGCT GCACTCAACG CGCGTCGTCT GGCGCTGCCG AGCAAACTCA CCGATCGCCT GCTGGCCGGC ATTGTGCCAT CGTCGGCCAC CGCAAATACC GCCACTGTGC CTGCCCGTGA CGGCCAGCAA GTGGCCAAGG CCTTCGCCGT GCCGGACAAC GGCCTGCGCA TTGTCGGCCG CGCCGTGGCC CAGCCGCCGC TGGCACCGAA CAAGGCCTTT GGCGACAGCG ATGAATTCGT CGCCACCATG CTGCCGATGG CCGAACAGGC GGCCAAGCGC ATTGGTATCG ATCCACGCTA CCTGGTGGCC CAGGCTGCAC TGGAAACCGG GTGGGGCAAG TCGGTCATGC GCAACACCGA TGGCAGCAGC AGCCACAACC TGTTCGGCAT CAAAGCCACT GGCAACTGGG ACGGCGGTGA GGCGAGGGCG ATTACCAGCG AATACCGTGA TGGCCAGTTC GTCAAGGAGA CGGCAGCGTT CCGTTCGTAC GATTCCTACC AGGACAGCTT CCACGACCTG GTGAGCCTGT TGCAGAACAA TTCGCGCTAT CAAGATGCGG TGAAGGCCGC CGATAAACCA GAGCAGTTCG TGCAAGAGTT GCAAAAGGCC GGGTACGCCA CCGACCCGAA TTACGCCAGC AAGATCTCGC AGATCGCAAG ACAGATGAAG TCGTACGAGC ACTACGCAAT GCTCGGTACT GCAACGAAAC TTTAA
|
Protein sequence | MNSKSLVSGS ADSGAYTDLN RLSSLKHGDR DSDANVRKVA QEFESLFISE MLKASRKASD VLADDNPMNT ETVKQYRDMY DQQLAVSMSR EGGGIGLQDV LVRQLSKNKA SQASTSPFPR TEGNAPALWG NKVAEPVHAT QSTATRNDVA ALNARRLALP SKLTDRLLAG IVPSSATANT ATVPARDGQQ VAKAFAVPDN GLRIVGRAVA QPPLAPNKAF GDSDEFVATM LPMAEQAAKR IGIDPRYLVA QAALETGWGK SVMRNTDGSS SHNLFGIKAT GNWDGGEARA ITSEYRDGQF VKETAAFRSY DSYQDSFHDL VSLLQNNSRY QDAVKAADKP EQFVQELQKA GYATDPNYAS KISQIARQMK SYEHYAMLGT ATKL
|
| |