Gene Pput_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1466 
SymbolflgD 
ID5192511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1642884 
End bp1643588 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content57% 
IMG OID640585936 
Productflagellar basal body rod modification protein 
Protein accessionYP_001266807 
Protein GI148546705 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATCG ATACTAACGG TGTAAACCTC AATGACGTGC TGTCGGCGTC GGGCGTGGGC 
ACCAGCACCA AAAAGACCAC GGACACTGCA TCCAAAACCG GCAACGATTC GCTCGGCAAA
GATGCCTTTC TGCAGCTGCT GGTCACCCAG ATGCAACACC AGAACCCGCT GGACCCGCAG
GATAACAGCG AGTTCGTTGC CCAGTTGGCG CAGTTCAGCA GCCTGGAAGG TATTACCTCG
CTGAACGATT CGGTCAGCTC CATCACCAGT GCCATGGCCT CGTCCCAGGC GCTTCAGGCG
TCGTCGCTGG TAGGGCGCTC GGTGGTGGTT CAGAACGACA AGGCTGTGGT TGATACCGCT
GAAAGCTTCA ATGCCCAGTT CGTTGTGCCT CAGGCAATCA GTGAAGCGAA GATCACTATC
AAGGACAAGG ATGGCAACAC GGTCAAGACC ATCGAGTTGG GTGAGCAGAA AGCCGGTTAC
GCCGACTTCA TCTGGGACGG TACCAACAAC AGTGGCGAGA AAGTGGACCC GGGCACTTAC
ACCTTCACCG CTAGCACCAC AGTCGATGGC GAGGCGGTGC AAATGAGCAC GCTGTTGCCG
GCCAAGGTAA CCAGCGTCAG CTTCAGTGCC TCAGGAGAAA TGGTGCTCAA CCTTGCCGGT
GTAGGCAAGG TCTCCCTCTC CGACGTGCAA ACCATCGGTA TCTAA
 
Protein sequence
MAIDTNGVNL NDVLSASGVG TSTKKTTDTA SKTGNDSLGK DAFLQLLVTQ MQHQNPLDPQ 
DNSEFVAQLA QFSSLEGITS LNDSVSSITS AMASSQALQA SSLVGRSVVV QNDKAVVDTA
ESFNAQFVVP QAISEAKITI KDKDGNTVKT IELGEQKAGY ADFIWDGTNN SGEKVDPGTY
TFTASTTVDG EAVQMSTLLP AKVTSVSFSA SGEMVLNLAG VGKVSLSDVQ TIGI