Gene Pput_1426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1426 
Symbol 
ID5194378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1599255 
End bp1600205 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content55% 
IMG OID640585891 
Producttransposase, IS111A/IS1328/IS1533 
Protein accessionYP_001266768 
Protein GI148546666 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0372411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.895779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCT TCTTGGGTAT CGATGTTTCC AGTCTCTCCC TTGATGCTGC GGTGCGGCCA 
CAGGGCATCA AAATGCATTT AAGCAATGAT CCCACAGGCT TTGAGGCGCT ACTGGAGAGC
CTTCGCAAGC TCAGTATCAA GCGCGTCCTG TTAGAGGCGA CGGGTGGCTA CGAGCGAGAT
GTCATGCGTT TTCTACAGGA CGCTGGCTAC AAGGTCATAC GCGTTAATCC CAGGCGAGCC
AGGTCATTCG CTGACTCTCT AGGCATCAAG GCCAAGACTG ACGCCATCGA CGCCGAGGTT
CTGGCGCACT ATGCCGAAGT CATTCCAGAT CAACCCTCCC TGCGAATCAG CCCCGAACGA
GCGCTTCTGC GAGAGTTGCT TCAGCAACGT GATCGGTTGG TTCAACAGCG AGATGACGAC
CTGCGGCGCC TGAAGCAGGT GCAATCGACT GCAGTTGCTA ACTACCTGAA TGCCAACCTG
AAACACTTCA AAGCGCAGAT CAAACTGGTT GAGCGTGAGA TCGAACAGCA AACCGCGATG
CTGAACGACG AACGGGTTAC CCAACTGATT AAAGTGAAAG GCATTGGGAT GGTGACAGCG
GGCAAGCTAG TAGCGCTGCT GCCGGAGCTG GGTCGGGTTG AATCCAGAGA AATTGCCTCC
CTGGTCGGAG TGGCGCCCTT CAACCACGAC AGTGGGAAAT TCATGGGCAA GCGCTCTATC
TCTGGCGGAC GATTTGCGGT CAGGCGATCG CTGTACATGG CATGCCTTGT GGCGATGAGA
TACAACCCAG CACTCAAGGC TCGTTATCAG TCACTGCGGG AGCGCGGAAA ACTTCCCAAA
GTCGCTATCG TGGCCTGCAT GAGAACGTTC ATCGTGCGGT TAAATGCCAT GCTCAGAACG
GGTACATCAT GGCTCGATCT AGTGCTACCG CAGCCTGAAA GTACAACGTA A
 
Protein sequence
MASFLGIDVS SLSLDAAVRP QGIKMHLSND PTGFEALLES LRKLSIKRVL LEATGGYERD 
VMRFLQDAGY KVIRVNPRRA RSFADSLGIK AKTDAIDAEV LAHYAEVIPD QPSLRISPER
ALLRELLQQR DRLVQQRDDD LRRLKQVQST AVANYLNANL KHFKAQIKLV EREIEQQTAM
LNDERVTQLI KVKGIGMVTA GKLVALLPEL GRVESREIAS LVGVAPFNHD SGKFMGKRSI
SGGRFAVRRS LYMACLVAMR YNPALKARYQ SLRERGKLPK VAIVACMRTF IVRLNAMLRT
GTSWLDLVLP QPESTT