Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1426 |
Symbol | |
ID | 5194378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1599255 |
End bp | 1600205 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640585891 |
Product | transposase, IS111A/IS1328/IS1533 |
Protein accession | YP_001266768 |
Protein GI | 148546666 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0372411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.895779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCT TCTTGGGTAT CGATGTTTCC AGTCTCTCCC TTGATGCTGC GGTGCGGCCA CAGGGCATCA AAATGCATTT AAGCAATGAT CCCACAGGCT TTGAGGCGCT ACTGGAGAGC CTTCGCAAGC TCAGTATCAA GCGCGTCCTG TTAGAGGCGA CGGGTGGCTA CGAGCGAGAT GTCATGCGTT TTCTACAGGA CGCTGGCTAC AAGGTCATAC GCGTTAATCC CAGGCGAGCC AGGTCATTCG CTGACTCTCT AGGCATCAAG GCCAAGACTG ACGCCATCGA CGCCGAGGTT CTGGCGCACT ATGCCGAAGT CATTCCAGAT CAACCCTCCC TGCGAATCAG CCCCGAACGA GCGCTTCTGC GAGAGTTGCT TCAGCAACGT GATCGGTTGG TTCAACAGCG AGATGACGAC CTGCGGCGCC TGAAGCAGGT GCAATCGACT GCAGTTGCTA ACTACCTGAA TGCCAACCTG AAACACTTCA AAGCGCAGAT CAAACTGGTT GAGCGTGAGA TCGAACAGCA AACCGCGATG CTGAACGACG AACGGGTTAC CCAACTGATT AAAGTGAAAG GCATTGGGAT GGTGACAGCG GGCAAGCTAG TAGCGCTGCT GCCGGAGCTG GGTCGGGTTG AATCCAGAGA AATTGCCTCC CTGGTCGGAG TGGCGCCCTT CAACCACGAC AGTGGGAAAT TCATGGGCAA GCGCTCTATC TCTGGCGGAC GATTTGCGGT CAGGCGATCG CTGTACATGG CATGCCTTGT GGCGATGAGA TACAACCCAG CACTCAAGGC TCGTTATCAG TCACTGCGGG AGCGCGGAAA ACTTCCCAAA GTCGCTATCG TGGCCTGCAT GAGAACGTTC ATCGTGCGGT TAAATGCCAT GCTCAGAACG GGTACATCAT GGCTCGATCT AGTGCTACCG CAGCCTGAAA GTACAACGTA A
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Protein sequence | MASFLGIDVS SLSLDAAVRP QGIKMHLSND PTGFEALLES LRKLSIKRVL LEATGGYERD VMRFLQDAGY KVIRVNPRRA RSFADSLGIK AKTDAIDAEV LAHYAEVIPD QPSLRISPER ALLRELLQQR DRLVQQRDDD LRRLKQVQST AVANYLNANL KHFKAQIKLV EREIEQQTAM LNDERVTQLI KVKGIGMVTA GKLVALLPEL GRVESREIAS LVGVAPFNHD SGKFMGKRSI SGGRFAVRRS LYMACLVAMR YNPALKARYQ SLRERGKLPK VAIVACMRTF IVRLNAMLRT GTSWLDLVLP QPESTT
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