| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1425 |
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| Symbol | |
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| ID | 5194377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1597445 |
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| End bp | 1599004 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585890 |
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| Product | transcriptional regulator, TyrR |
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| Protein accession | YP_001266767 |
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| Protein GI | 148546665 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.392472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA AAGTCCATTG CCAGAACCGC ATTGGCATCC TGCGCGACAT CCTCAACCTG
CTGGTTGAGT ACGGCATCAA CGTGCTGCGC GGTGAGGTGG GCGGTGACCA TGGCAACGCC
ATCTACCTGC ACTGCCCGAA CCTGATCAAC CTGCAATTTC AGGCCCTGCG GCCGAAGTTC
GAGGCGATTG CCGGGGTGTT CGGCGTAAAG CGTGTGGGCC TGATGCCCAG CGAACGCCGG
CACATGGAGC TGAATGCGTT GCTGGGGGCG CTGGATTTCC CGGTGCTGTC GATCGACATG
GGCGGCAGCA TCGTTGCGGC CAACCGTGCC GCCGCTCAGT TGCTTGGCGT GCGGGTTGAT
GAGGTGCCGG GCATGCCGCT GGCGCGCTAC GTAGAAGACT TCGATCTACC GGAGCTGGTG
CGGGCCAACA AGTCGCGCAT CAACGGCTTG CGCATCAAAG TCAAAGGCGA TGTGTTCCTG
GCCGATATCG CACCGCTGCA GTCCGAGCAC GATGACAGCG AGGCACTGGC CGGCGCGGTG
CTTACCCTGC ACCGCGCCGA CCGAATCGGC GAGCGTATCT ACAATGTGCG CAAGCAAGAG
CTGCGTGGCT TCGACAGTAT CTTCCAGAGC TCGCGGGTGA TGGCTGCCGT GGTGCGTGAA
GCGCGGCGCA TGGCGCCGCT GGATGCACCG TTGCTGATCG AGGGCGAAAC CGGTACCGGC
AAGGAGTTGC TGGCGCGCGC CTGCCACCTG GCCAGCCCGC GTGGACAGTC GCCGCTGATG
GCGCTCAACT GCGCCGGGTT GCCCGAGTCG ATGGCCGAGA CCGAGCTGTT CGGTTACGGC
CCTGGGGCAT TCGAAGGGGC ACGGGCCGAA GGCAAGCTGG GGCTGCTGGA GTTGACTGCA
GGCGGCACGC TGTTCCTTGA CGGGGTAGGG GAGATGAGCC CGCGCCTGCA GGTAAAGCTG
CTGCGCTTTC TGCAGGACGG CTGCTTCCGT CGGGTGGGTA GCGATGAAGA GGTCTACCTG
GATGTGCGGG TGATTTGTGC AACCCAGGTG GATTTGTCCG AGTTGTGTGC CCGTGGCGAG
TTTCGCCAGG ACCTGTATCA CCGGCTCAAT GTACTGTCGC TGCACATTCC GCCTTTGCGC
GAATGCATGG ATGGTCTGGA GGGGTTGGTG CAGCATTTTC TCGATCAGGC CAGTCGACAG
ATTGGCTGCG CCATGCCGCG CCTGGCACCG GCGGCAATGG ACAAACTTGG GCAGTACCAC
TGGCCAGGTA ATGTAAGGCA GTTGGAAAAC GTTTTGTTCC AGGCGGTTTC GTTATGTGAC
GGCGGCGTGG TTAAAAGCGA GCATATCCGC TTGCCGGATT ATGGCGTGCG GCAACCGTTA
GGCGAGTTTT CGCTGGAAGG GGATCTTTCG CAGATAGTAG GGCGCTTTGA AAAGGCGGTG
CTGGAAAGTT TGATAGGTGA GTTTCCCAGT AGTCGGGCCT TGGGCAAAAG ACTGGGTGTT
TCGCACACGA CAATTGCCAA CAAGTTGAGG GATTACTCGC TTAACAAGTC GGCGGATTAG
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| Protein sequence | MRIKVHCQNR IGILRDILNL LVEYGINVLR GEVGGDHGNA IYLHCPNLIN LQFQALRPKF
EAIAGVFGVK RVGLMPSERR HMELNALLGA LDFPVLSIDM GGSIVAANRA AAQLLGVRVD
EVPGMPLARY VEDFDLPELV RANKSRINGL RIKVKGDVFL ADIAPLQSEH DDSEALAGAV
LTLHRADRIG ERIYNVRKQE LRGFDSIFQS SRVMAAVVRE ARRMAPLDAP LLIEGETGTG
KELLARACHL ASPRGQSPLM ALNCAGLPES MAETELFGYG PGAFEGARAE GKLGLLELTA
GGTLFLDGVG EMSPRLQVKL LRFLQDGCFR RVGSDEEVYL DVRVICATQV DLSELCARGE
FRQDLYHRLN VLSLHIPPLR ECMDGLEGLV QHFLDQASRQ IGCAMPRLAP AAMDKLGQYH
WPGNVRQLEN VLFQAVSLCD GGVVKSEHIR LPDYGVRQPL GEFSLEGDLS QIVGRFEKAV
LESLIGEFPS SRALGKRLGV SHTTIANKLR DYSLNKSAD
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