Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1390 |
Symbol | |
ID | 5190465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1558180 |
End bp | 1559784 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640585855 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001266732 |
Protein GI | 148546630 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTCCC CTTATTTCAT CCTGCAAGGA TCGCCCAAGA TGCGCATGAA TTTGCCCGTC ACTGAGCACG AAAGAACCTT CCCCGGCGAT CAACGCCTTA TTTCCACGAC TGACCTCGGC AGCCGAATCA CCTACTGCAA CGACGCCTTT GTGGCAATCA GCGGCTTTAC CTATGACGAA CTGGTCGGCC AACCGCACAA CCTGGTGCGC CACCCGGACA TGCCGCCTGC GGTGTTTGGC CACATGTGGG AGACCATCAA GCAGGGCAAA CCCTGGATGG GCATCGTCAA GAACCGGGCG AAGAACGGCG ATTACTATTG GGTAAGCGCC TATGTCACGG CGATATACGA ACAAGGCCGG ATCAGTGGCT ACGAGTCGGT GCGCTCGGTG CCCACGCGCG AGCAGATCCG CCGTGCCGAG GCACTGTATG CGCGCTTGCG TGATGGTCGC GGCCCAGTGC CGTGGGCTGC TCGCCTGGGG CACGGCCTGG GCCATGGCTG GCCACTGATC GGCGCAGGCC TGCTGTCGGC GGCGGGTTAC CTTTGGCTGC CCCCCTATGC GGCGCTCGCG GTGCTGATGG CAAGTCTGCT GCTGGCTTGG TACTGGGTCG AGCACCGGCA GAACCAGGCC ATTCGCCGCA CCTTGGCTGA GCATCCCAAG GCCTTTACCA GTCCGTTGGT GGCGCTGACC TACAGCGACA ACCCAGGCTT GCAGGGCCAG CTCGACCTGG CCATCATCAG CGAAGAGGCC CGCCTGCAAA CGGCCCTGAC CCGGCTGGTG GATGCCGGTG TCGGGGTAAA GTCGCGGGCG GCGCAGTCTT CCGACCTGTC CGATGCCCAG GCGCAGATGC TCGACCGGCA GCGCAGCGAG ACCGACCAGT CCGCCACGGC GATCGCGCAG ATGGCGGCAA CCATCCAGCA GGTCACCCAC AACGTGCAGA GCACGGCACA CGCGGCAGGT GATGCCGACC AACTGGCGCA GCAGGGCAGC GAGCTGGCCC TGAAGAGCCT GCAAGCCATG GGCAGCATGA GCGACGCGGT CAATGACATT GGTCAGGCGG TCAACGCCTT GGCCGAGCAG ACCCAGTCGA TTGGCAGCGT GGTCGACGTG ATCACTTCGA TTGCCGAGCA GACCAACCTG CTGGCGCTTA ACGCCGCCAT TGAAGCGGCG CGCGCCGGTG AGCAAGGTCG GGGGTTCGCC GTGGTGGCTG ATGAGGTGCG GTCATTGGCG CAGCGTACCC GCGCGTCGAC CGATGAGATC CACCATATCA TTGCCTCGTT GAGGGCCGGG GCGGAGCGAG CGGTGAGCAC TGCCAGCCGT GGCGAGCAGA TTTCCCGGGA CAGTGTGCAC AGTGTCGAGG CGGTGCAGGC GGCGCTGAGC GGGATTGCCG TGGCGGTCAG CCGCATCACC GGCATGAGCC AGCAGATGGC CACGGCATCG GAGCAACAGA GCCATGTGGC TGAAGACATC AACCAGCAGA TCGTGAGGAT TGCCCAACTG TGCGACCAGA GTGCCGGGCA AGCCAGGCAG GGCGCGGAAA TCAGCCAGGA CCTCGAGCGC ATGGCGGAGT ACCTGCATAG CCTGGCGGAA AGGTTCAACC GTTGA
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Protein sequence | MISPYFILQG SPKMRMNLPV TEHERTFPGD QRLISTTDLG SRITYCNDAF VAISGFTYDE LVGQPHNLVR HPDMPPAVFG HMWETIKQGK PWMGIVKNRA KNGDYYWVSA YVTAIYEQGR ISGYESVRSV PTREQIRRAE ALYARLRDGR GPVPWAARLG HGLGHGWPLI GAGLLSAAGY LWLPPYAALA VLMASLLLAW YWVEHRQNQA IRRTLAEHPK AFTSPLVALT YSDNPGLQGQ LDLAIISEEA RLQTALTRLV DAGVGVKSRA AQSSDLSDAQ AQMLDRQRSE TDQSATAIAQ MAATIQQVTH NVQSTAHAAG DADQLAQQGS ELALKSLQAM GSMSDAVNDI GQAVNALAEQ TQSIGSVVDV ITSIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRSLA QRTRASTDEI HHIIASLRAG AERAVSTASR GEQISRDSVH SVEAVQAALS GIAVAVSRIT GMSQQMATAS EQQSHVAEDI NQQIVRIAQL CDQSAGQARQ GAEISQDLER MAEYLHSLAE RFNR
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