| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1383 |
|---|
| Symbol | |
|---|
| ID | 5192856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1550923 |
|---|
| End bp | 1551849 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640585848 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001266725 |
|---|
| Protein GI | 148546623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.22021 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.350213 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG TCCGCAAGAA CCCTGACGCC TTTGCCTTCC AGGTAATGCT GGGCCTTTGC
CTGATCTGGG GCTGCCAGCA GGTACTGATC AAGACCGCCG CCGCAGACAT TGCTCCGGTG
ATGCAGGCAG CACTGCGCAA TGGCATTGCC GCTGTGCTGG TAGGCCTGAT GCTGTGCTGG
CGGGGTGGCT GGGAGCAGGT CGGCAGCACC TGGCGCGCAG GGTTGGTGGC GGGCGGGCTG
TTCGGGGTGG AGTTTCTGTT CATTGCCGAA GGGCTGAAAC TGACCTCGGC GGCGCACATG
TCGGTGTTCC TCTATACCGC GCCGGTATTT ACCGCCTTGG GCCTGCATTT TCGTCTACCC
AGTGAACGCT TGCGGCTGCT GCAGTGGCTG GGCATTCTGC TGGCCTTCGG CGGCATTGCC
ATGGCCTTTG CCGGTGGCAC TTCGTTCGAG CACATGGACA GCCGCACCTT GCTGGGAGAT
GCCTTTGGCG TGATCGCCGG GCTGGCCTGG GGCGCGACCA CGGTGGTGGT GCGTTGTTCA
CGGCTATCGG AGGCGCCGGC GACCTTGACC CTGTTCTATC AGCTGGCGGT CGGTTTTGCC
GGGCTGCTGC TGATCGCCCT GCTCAGCGGG CAGATCGGCG CGGTGTCGCT GACGCCGCTG
GCGATGGGCG GTGTATTGTT CCAGGGAATT GTGGTGTCGT TCATCAGCTA CCTCACCTGG
TTCTGGTTGC TGCGCAAATA CCTGGCGTCG AACCTCGCGG TGTTTTCCTT CATTACCCCA
TTGTTCGGGG TGACCTTTGG CGTTTTGCTG CTGGATGAGC CGCTCAGTGC GAATTTCGTG
GTGGGCGCGT TGATGGTGTT GCTGGGTGTG ATCCTGGTAA GTGCCGAGCC TTGGGTGAAA
CAACAATTGC GGCGGTTGGT AGGGTGA
|
|---|
| Protein sequence | MSAVRKNPDA FAFQVMLGLC LIWGCQQVLI KTAAADIAPV MQAALRNGIA AVLVGLMLCW
RGGWEQVGST WRAGLVAGGL FGVEFLFIAE GLKLTSAAHM SVFLYTAPVF TALGLHFRLP
SERLRLLQWL GILLAFGGIA MAFAGGTSFE HMDSRTLLGD AFGVIAGLAW GATTVVVRCS
RLSEAPATLT LFYQLAVGFA GLLLIALLSG QIGAVSLTPL AMGGVLFQGI VVSFISYLTW
FWLLRKYLAS NLAVFSFITP LFGVTFGVLL LDEPLSANFV VGALMVLLGV ILVSAEPWVK
QQLRRLVG
|
|---|
| |