Gene Pput_1363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1363 
Symbol 
ID5191256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1531521 
End bp1532747 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content49% 
IMG OID640585828 
Productouter membrane porin 
Protein accessionYP_001266705 
Protein GI148546603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.475695 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0504292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA AAATGCGCTA CGCCATCTTA CTTGCAGGTA GCACCTCCGT TTCACCACTG 
CTTGCTGCCG GCTTTTTTGA GGACAGCAAG TCACGTCTAG ACATCAGAAA CTTTTATTAC
AACGGTGATT TCCGTGAGGG TACCGCAGTT TCTAAGCGAG AAGAATGGGT GCAAGGATTC
CTGTTGCAGT ACGAATCCGG CTTCACTCAG GGGAGTGTAG GTATTGGCGT GGATGCTCTT
GGATACCTAG GCATCCGTCT GGACTCAAGT GCTGATCGAA CAGGCAGTGG GCTCGTACCG
ACCACAGCAT CAGGTAATGC TGCTCATGAT TACTCCAAAG GTGGGGCAAC GGCAAAGGTT
CGGGTGTCCA AAACCGAATT ACGCTATGGG ACTGCTCTCC CAAAAGTTCC AGTTCTGCAG
TACAACGGCA GTCGCCTCTT CCCCCAATAC TTTCAAGGTA CACAAATCAG CTCCTCCGAA
TTCGAGGGCC TTACGGCAAA TGTGGCACAA TTCAACCGTA CAACTGCACC TGATTCTACC
GACCAACAAC ACATAGCATT GGCAGCTAAG AACGGTCGCT ACCCGGCTGT CGGCATTGGT
GATCACTTCC GCTACGGCGG GCTAAATTAC AAAATCACCC CAACACTAAC TTTAAGTTAC
TACCATGGCG AGTTGGAAAA CGTCTACGAA CAAAACTTCC TGGGTATAAA TAATCGCCAG
AAATTCGGCC CAGGGATCCT GGAAATAGAT GTCCGCACAT TCATAAGTGA TGAGGCAGGG
GATGCAAAGG CTGGAGGTGT GGACAATCAA ACATATACTG GCCTGATCAG CTATTCTCTT
GACAGCGGTC ACAGCCTCCT TGCCACCTAT CAGCATCTAG AAGGAGACAC CGGTTTTCCA
TATATAAACA ACCCATACCT GCCAAACTAT GTTCAATATC ATGACTTCGG AGAGGCGGGA
GAGAGAAGCT GGCAACTTCG ATACGGTTAT GATTTCAAGC ACATTGGATT AAAGGGGCTA
AGTTTATTCA CGGACTACAT TCACGGTTCT CATCTGAATA AGCGAGGCGG AGGTGCCGAA
TGGGAGCGTG ACATTGACAT GACCTACGAG ATCCCTGGGG TCAATGGGCT AACACTTAGA
TGGCGCAACG CAACCTATCG CAGCGACATT AATCGTGACA TCGACGAGAA CAGGCTGATC
CTCAATTACA CAATCGCACT CAAATAA
 
Protein sequence
MNSKMRYAIL LAGSTSVSPL LAAGFFEDSK SRLDIRNFYY NGDFREGTAV SKREEWVQGF 
LLQYESGFTQ GSVGIGVDAL GYLGIRLDSS ADRTGSGLVP TTASGNAAHD YSKGGATAKV
RVSKTELRYG TALPKVPVLQ YNGSRLFPQY FQGTQISSSE FEGLTANVAQ FNRTTAPDST
DQQHIALAAK NGRYPAVGIG DHFRYGGLNY KITPTLTLSY YHGELENVYE QNFLGINNRQ
KFGPGILEID VRTFISDEAG DAKAGGVDNQ TYTGLISYSL DSGHSLLATY QHLEGDTGFP
YINNPYLPNY VQYHDFGEAG ERSWQLRYGY DFKHIGLKGL SLFTDYIHGS HLNKRGGGAE
WERDIDMTYE IPGVNGLTLR WRNATYRSDI NRDIDENRLI LNYTIALK