| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1356 |
|---|
| Symbol | |
|---|
| ID | 5194645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1525853 |
|---|
| End bp | 1526836 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640585822 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001266699 |
|---|
| Protein GI | 148546597 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0724993 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGA TGAGCTTTTC CGATTTCGAG TACGCCGGTA AGCGCAAGCA AACCCGTCGC
GAGCGTTTCC TGGCCGAGAT GGAACAGGTG GTGCCGTGGA GCGGGTTGGT GGCGTTGATC
GAGCCGCATT ACCCTAAGGC TGGCGGTGGC CGCAAGCCTT ATCCTCTGGA AACCATGCTG
CGCATTCACC TGCTGCAGAA CTGGTTCTCT TTGAGCGATC CCGCCATGGA AGAGGCGCTG
TACGAGATCA CTTCGATGCG CCAGTTCGCT CGTCTGACGC TCAGCGCTCC GATCCCCGAA
GACACGACGA TCATGAACTT CCGGCACCTG CTGGAGAAGC ATCAGTTGGC GGCCGGCATT
CTGGAAACCA TCAACAATTA CCTGCAAGAC AAGGGCCTGT CGTTGCGCCA GGGCACCATT
GTCGACGCTA CCATCATCCA CGCGCCTAGT TCGACCAAGA ACAAGGAAGG CAAGCGCGAT
CCTGAAATGC ATCAAACGAA GAAGGGCAAC CAGTACTATT TCGGCATGAA GGCCCACATC
GGCGCGGATG CTGAATCGGG TCTGGTGCAT CACGTTCATG GCACCGCCGC GAACGTAGCT
GACGTGACGG AGGTCGCTCA GCTATTGCAT GGCGAAGAGA ATGTCGCGTG TGCGGATGCG
GGTTACACAG GCGTGGAAAA GCGGCCAGAA CACGAGGGAC GGCAGGTGAT ATGGCAGGTC
GCTGCCCGCC GCAGCACCTA CAAACACTTG AGCAAACGCA GCGTGCTCTA CCAAGCCAAG
CGCAAGATCG AAAAGGCCAA GGCGCAAGTG CGTGCGAAGG TGGAGCACCC GTTCCGGGTG
ATCAAACGCC AGTTCGGCTA TGTAAAGACT CGTTTTCGCG GCTTGGCCAA GAACACGGCG
CAACTGACCA CGCTGTTTGC CCTGTCGAAT CTGTGGATGG TGCGCCGGCA ATTATTGCCT
GCTGCGGGAG AGGTGCGCCC GTGA
|
|---|
| Protein sequence | MSQMSFSDFE YAGKRKQTRR ERFLAEMEQV VPWSGLVALI EPHYPKAGGG RKPYPLETML
RIHLLQNWFS LSDPAMEEAL YEITSMRQFA RLTLSAPIPE DTTIMNFRHL LEKHQLAAGI
LETINNYLQD KGLSLRQGTI VDATIIHAPS STKNKEGKRD PEMHQTKKGN QYYFGMKAHI
GADAESGLVH HVHGTAANVA DVTEVAQLLH GEENVACADA GYTGVEKRPE HEGRQVIWQV
AARRSTYKHL SKRSVLYQAK RKIEKAKAQV RAKVEHPFRV IKRQFGYVKT RFRGLAKNTA
QLTTLFALSN LWMVRRQLLP AAGEVRP
|
|---|
| |