| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1353 |
|---|
| Symbol | |
|---|
| ID | 5193665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1522768 |
|---|
| End bp | 1523382 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585820 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_001266697 |
|---|
| Protein GI | 148546595 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.886307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.112271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCAC CCCCCATGTC CCGCGTACTG ATCATCGAAA GCAGCGCCCG CCAGCAGGAT
TCCGTTTCCC GTCAGCTGAC CAAGGACTTC ATTCAGCAAT GGCAGGCCGC TCACCCGGCC
GATCAGATCA CTGTGCGCGA CCTGGCAGTA AGCCCGGTTC CCCACTTGGA CGCGAACCTG
CTGGGTGGCT GGATGAAACC CGAAGAACAG CGCAGCGCCG CCGAACTGGA GGCCCTGGCC
CGTTCTAACG AGCTGACGGA TGAATTGCTG GCTGCCGACG TACTGGTGAT GGCTGCGCCC
ATGTACAACT TCACCATCCC CAGCACCCTG AAAGCCTGGC TGGACCATGT GCTGCGTGCC
GGCATCACCT TCAAATACAC CCCGACCGGC CCGCAAGGCC TGCTGACTGG CAAGCGCGCC
ATCGTCCTGA CTGCCCGCGG CGGCATCCAT GCGGGTGCCA GCAGTGACCA TCAGGAACCG
TACCTGCGCC AGGTCATGGC TTTCATCGGC ATCCACGATG TCGACTTCAT CCATGCCGAA
GGCCTGAACA TGAGCGGCGA GTTCCACGAG AAGGGCGTCA ACCAGGCCAA GGCCAAGCTG
GCAGCGGTGG CCTGA
|
|---|
| Protein sequence | MEAPPMSRVL IIESSARQQD SVSRQLTKDF IQQWQAAHPA DQITVRDLAV SPVPHLDANL
LGGWMKPEEQ RSAAELEALA RSNELTDELL AADVLVMAAP MYNFTIPSTL KAWLDHVLRA
GITFKYTPTG PQGLLTGKRA IVLTARGGIH AGASSDHQEP YLRQVMAFIG IHDVDFIHAE
GLNMSGEFHE KGVNQAKAKL AAVA
|
|---|
| |