Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1341 |
Symbol | |
ID | 5193645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1506704 |
End bp | 1508011 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640585808 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001266685 |
Protein GI | 148546583 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.268345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.168111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAG CATTGAACAA CGGCCCGGCG CAGCGCGCGC CGTCCTATTA CAGCGCCACC CTCAACGACC ACAGCGAGTA CCCGCAACTC AAAGGCACGG TGCAGGTGGA TGTGGCGATC ATCGGCGGTG GCTTTACGGG CGTGGCCACG GCGGTTGAAC TGGCCGAGCG CGGCCTGAAG GTCGCCATCG TCGAAACCAA CCGTATCGGC TGGGGCGCCA GCGGTCGCAA CGGCGGCCAG GTCACCGGCA GCCTGTCGGG CGACGAGGCC ATGCGCTCGC AGATGCGCAA CCACCTGGGC GCCGAAGTGG ACGATTTCAT CTGGCACTTG CGCTGGCGCG GGCACCAGGT GATCGAACAG CGCGTGGCGC GCTATGGCAT CGATTGCGAC CTCAAGCGTG GCCATTTGCA TGCCGCGATG AAACCTTCGC ACATGAACGA ACTGCGTGCA TTCGAGGCCG AAGCACAGCG CCGCGGCATG GGCGAGCAGG TGCAACTGCT CGACCGCGCT GCAGTGGCCG AGCATCTGCA AAGCCCGCTT TATCTGGGTG CGTTGAAGAA CCTGCGCAAC CTGCACCTGC ACCCACTCAA CCTGTGCCTG GGCGAAGCCC GTGCCGCGCA TGGCCTGGGT GCACTGATAT TCGAAAATTC CGAAGTGCTG GACATCGTCC ATGGCCCGCG CCCGGCGGTG GTTACCGCCC ACGGCCGGGT CGAGGCACGC CAGGTGATGT TGGCCGGCGA TGTGTATCAC AAGCTCGAAA AGCGCCAGCT CAAGGGCAAG ATCTTCCCGG CCATGGGCGG TATCGTCACC ACCGCGCCGC TGGGTGAGCT GGCCGAGCAG ATCAACCCGC AGGACCTGGC GGTGTACGAC TGCCGCTTCG TCCTCGACTA CTACCGCCTG ACGGCCGACA AGCGCCTGCT GTTCGGCGGC GGCGCCAACT ACTCGGGCAA GGATTCACGC GACATCGAAG GCGAATTGCG CCCCTGCATC GAACGCACCT TCCCGGCATT GAAGGGGGTG CCGATCGAGT TCCAGTGGAG CTGCGCCATG GGCATCGTGG TCAACCGCAT CCCGCAGCTG GGCAAGCTGT CGGACAACGT GTGGTACTGC CAGGGTTACT CGGGGCACGG CATTGCCACC AGCCACATCA TGGGCGAGAT CATGGCCGAA GCGTTGACCG GCACGCTGGA GCAGTTCGAC ACCTTCGCCC AGTGCAAGCA TGTGCGGGTG CCGATGGGGG ACTTGCTGGG GAACCCGCTG CTGGCGGCGG GGATGTGGTA TTACCAGATG CTCGAGAAGC TGCGCTGA
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Protein sequence | MNAALNNGPA QRAPSYYSAT LNDHSEYPQL KGTVQVDVAI IGGGFTGVAT AVELAERGLK VAIVETNRIG WGASGRNGGQ VTGSLSGDEA MRSQMRNHLG AEVDDFIWHL RWRGHQVIEQ RVARYGIDCD LKRGHLHAAM KPSHMNELRA FEAEAQRRGM GEQVQLLDRA AVAEHLQSPL YLGALKNLRN LHLHPLNLCL GEARAAHGLG ALIFENSEVL DIVHGPRPAV VTAHGRVEAR QVMLAGDVYH KLEKRQLKGK IFPAMGGIVT TAPLGELAEQ INPQDLAVYD CRFVLDYYRL TADKRLLFGG GANYSGKDSR DIEGELRPCI ERTFPALKGV PIEFQWSCAM GIVVNRIPQL GKLSDNVWYC QGYSGHGIAT SHIMGEIMAE ALTGTLEQFD TFAQCKHVRV PMGDLLGNPL LAAGMWYYQM LEKLR
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